Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQA2P01906 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQA2P01906 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQA2P01906 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
HLA-DQA2P01906 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
HLA-DQA2P01906 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.67■□□□□ 0.74
HLA-DQA2P01906 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
HLA-DQA2P01906 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HLA-DQA2P01906 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQA2P01906 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQA2P01906 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.67■□□□□ 0.74
HLA-DQA2P01906 ECEL1P1-201ENST00000373592 1742 ntBASIC19.67■□□□□ 0.74
HLA-DQA2P01906 FP325331.1-202ENST00000623531 1380 ntBASIC19.67■□□□□ 0.74
HLA-DQA2P01906 AC242852.2-201ENST00000615738 1807 ntBASIC19.67■□□□□ 0.74
HLA-DQA2P01906 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQA2P01906 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.66■□□□□ 0.74
HLA-DQA2P01906 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HLA-DQA2P01906 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQA2P01906 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HLA-DQA2P01906 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQA2P01906 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HLA-DQA2P01906 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQA2P01906 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HLA-DQA2P01906 AC010997.5-201ENST00000609182 354 ntBASIC19.66■□□□□ 0.74
HLA-DQA2P01906 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.66■□□□□ 0.74
HLA-DQA2P01906 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQA2P01906 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQA2P01906 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQA2P01906 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HLA-DQA2P01906 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HLA-DQA2P01906 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQA2P01906 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQA2P01906 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-DQA2P01906 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQA2P01906 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-DQA2P01906 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HLA-DQA2P01906 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.65■□□□□ 0.74
HLA-DQA2P01906 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HLA-DQA2P01906 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HLA-DQA2P01906 LINC00565-201ENST00000562710 2331 ntBASIC19.65■□□□□ 0.74
HLA-DQA2P01906 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HLA-DQA2P01906 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HLA-DQA2P01906 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
HLA-DQA2P01906 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQA2P01906 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQA2P01906 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HLA-DQA2P01906 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQA2P01906 AC009299.2-201ENST00000482477 511 ntBASIC19.64■□□□□ 0.73
HLA-DQA2P01906 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQA2P01906 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HLA-DQA2P01906 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HLA-DQA2P01906 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQA2P01906 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQA2P01906 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HLA-DQA2P01906 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQA2P01906 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQA2P01906 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.63■□□□□ 0.73
HLA-DQA2P01906 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQA2P01906 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DQA2P01906 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.63■□□□□ 0.73
HLA-DQA2P01906 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.63■□□□□ 0.73
HLA-DQA2P01906 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQA2P01906 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DQA2P01906 AC127496.7-201ENST00000625110 1798 ntBASIC19.62■□□□□ 0.73
HLA-DQA2P01906 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA2P01906 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA2P01906 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA2P01906 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA2P01906 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-DQA2P01906 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA2P01906 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.62■□□□□ 0.73
HLA-DQA2P01906 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA2P01906 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA2P01906 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.62■□□□□ 0.73
HLA-DQA2P01906 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA2P01906 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA2P01906 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA2P01906 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HLA-DQA2P01906 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA2P01906 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.61■□□□□ 0.73
HLA-DQA2P01906 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DQA2P01906 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA2P01906 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA2P01906 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DQA2P01906 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.61■□□□□ 0.73
HLA-DQA2P01906 AC009086.3-201ENST00000623486 1008 ntBASIC19.61■□□□□ 0.73
HLA-DQA2P01906 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HLA-DQA2P01906 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA2P01906 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA2P01906 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA2P01906 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA2P01906 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA2P01906 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA2P01906 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
HLA-DQA2P01906 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQA2P01906 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQA2P01906 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQA2P01906 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQA2P01906 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
HLA-DQA2P01906 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms