Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AC138932.3-201ENST00000567634 1902 ntBASIC19.59■□□□□ 0.73
CLDN1O95832 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN1O95832 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN1O95832 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN1O95832 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN1O95832 OR2I1P-207ENST00000453522 948 ntBASIC19.59■□□□□ 0.73
CLDN1O95832 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.59■□□□□ 0.73
CLDN1O95832 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN1O95832 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN1O95832 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN1O95832 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN1O95832 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CLDN1O95832 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN1O95832 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.58■□□□□ 0.73
CLDN1O95832 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN1O95832 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN1O95832 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.58■□□□□ 0.72
CLDN1O95832 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN1O95832 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN1O95832 TPRG1LP1-201ENST00000598702 760 ntBASIC19.58■□□□□ 0.72
CLDN1O95832 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN1O95832 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN1O95832 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CLDN1O95832 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN1O95832 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLDN1O95832 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN1O95832 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN1O95832 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLDN1O95832 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CLDN1O95832 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN1O95832 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN1O95832 DUX4L4-201ENST00000566884 1269 ntBASIC19.57■□□□□ 0.72
CLDN1O95832 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.57■□□□□ 0.72
CLDN1O95832 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CLDN1O95832 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN1O95832 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN1O95832 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN1O95832 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN1O95832 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.56■□□□□ 0.72
CLDN1O95832 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN1O95832 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN1O95832 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
CLDN1O95832 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN1O95832 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN1O95832 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN1O95832 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN1O95832 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN1O95832 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN1O95832 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CLDN1O95832 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CLDN1O95832 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CLDN1O95832 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN1O95832 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN1O95832 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN1O95832 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.55■□□□□ 0.72
CLDN1O95832 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CLDN1O95832 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN1O95832 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CLDN1O95832 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN1O95832 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.55■□□□□ 0.72
CLDN1O95832 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.55■□□□□ 0.72
CLDN1O95832 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.55■□□□□ 0.72
CLDN1O95832 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.55■□□□□ 0.72
CLDN1O95832 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.55■□□□□ 0.72
CLDN1O95832 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.55■□□□□ 0.72
CLDN1O95832 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.55■□□□□ 0.72
CLDN1O95832 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.55■□□□□ 0.72
CLDN1O95832 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN1O95832 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN1O95832 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN1O95832 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN1O95832 KRT19P1-201ENST00000405746 1186 ntBASIC19.54■□□□□ 0.72
CLDN1O95832 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN1O95832 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN1O95832 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CLDN1O95832 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN1O95832 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN1O95832 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.54■□□□□ 0.72
CLDN1O95832 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN1O95832 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CLDN1O95832 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN1O95832 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CLDN1O95832 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN1O95832 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN1O95832 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN1O95832 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN1O95832 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN1O95832 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN1O95832 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN1O95832 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.53■□□□□ 0.72
CLDN1O95832 FAM201B-201ENST00000458407 597 ntBASIC19.53■□□□□ 0.72
CLDN1O95832 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN1O95832 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN1O95832 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN1O95832 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN1O95832 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN1O95832 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN1O95832 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN1O95832 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN1O95832 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms