Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC136469.2-201ENST00000623944 1028 ntBASIC20.39■□□□□ 0.85
TRIM3O75382 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM3O75382 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM3O75382 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM3O75382 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM3O75382 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TRIM3O75382 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TRIM3O75382 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM3O75382 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TRIM3O75382 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM3O75382 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TRIM3O75382 SUDS3P1-201ENST00000505831 966 ntBASIC20.38■□□□□ 0.85
TRIM3O75382 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM3O75382 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM3O75382 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRIM3O75382 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM3O75382 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM3O75382 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM3O75382 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM3O75382 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM3O75382 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM3O75382 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
TRIM3O75382 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM3O75382 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM3O75382 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.37■□□□□ 0.85
TRIM3O75382 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM3O75382 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.37■□□□□ 0.85
TRIM3O75382 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM3O75382 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM3O75382 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM3O75382 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM3O75382 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM3O75382 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM3O75382 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM3O75382 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
TRIM3O75382 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRIM3O75382 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM3O75382 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM3O75382 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM3O75382 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM3O75382 LINC01529-204ENST00000636474 1715 ntBASIC20.36■□□□□ 0.85
TRIM3O75382 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM3O75382 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.36■□□□□ 0.85
TRIM3O75382 LINC00565-201ENST00000562710 2331 ntBASIC20.36■□□□□ 0.85
TRIM3O75382 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.36■□□□□ 0.85
TRIM3O75382 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM3O75382 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM3O75382 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.36■□□□□ 0.85
TRIM3O75382 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.36■□□□□ 0.85
TRIM3O75382 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM3O75382 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM3O75382 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM3O75382 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TRIM3O75382 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM3O75382 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM3O75382 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM3O75382 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM3O75382 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM3O75382 AC142381.2-201ENST00000566120 298 ntBASIC20.35■□□□□ 0.85
TRIM3O75382 AL499627.2-201ENST00000606283 725 ntBASIC20.35■□□□□ 0.85
TRIM3O75382 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM3O75382 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM3O75382 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM3O75382 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM3O75382 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM3O75382 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.35■□□□□ 0.85
TRIM3O75382 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM3O75382 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TRIM3O75382 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRIM3O75382 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM3O75382 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.34■□□□□ 0.85
TRIM3O75382 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM3O75382 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM3O75382 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
TRIM3O75382 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM3O75382 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRIM3O75382 AC079630.1-202ENST00000618127 1840 ntBASIC20.34■□□□□ 0.85
TRIM3O75382 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM3O75382 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM3O75382 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM3O75382 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM3O75382 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.33■□□□□ 0.85
TRIM3O75382 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
TRIM3O75382 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM3O75382 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM3O75382 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM3O75382 AP001330.3-201ENST00000520123 633 ntBASIC20.33■□□□□ 0.85
TRIM3O75382 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM3O75382 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.33■□□□□ 0.85
TRIM3O75382 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.33■□□□□ 0.85
TRIM3O75382 AL136967.2-201ENST00000623968 743 ntBASIC20.33■□□□□ 0.85
TRIM3O75382 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM3O75382 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.33■□□□□ 0.84
TRIM3O75382 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.33■□□□□ 0.84
TRIM3O75382 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.33■□□□□ 0.84
TRIM3O75382 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM3O75382 ANOS2P-203ENST00000472227 1816 ntBASIC20.32■□□□□ 0.84
TRIM3O75382 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TRIM3O75382 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM3O75382 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms