Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
FOXN1O15353 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.34■■□□□ 1.81
FOXN1O15353 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC26.34■■□□□ 1.81
FOXN1O15353 AC083906.2-201ENST00000511578 360 ntBASIC26.34■■□□□ 1.81
FOXN1O15353 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC26.34■■□□□ 1.81
FOXN1O15353 ITM2C-210ENST00000620962 501 ntBASIC26.34■■□□□ 1.81
FOXN1O15353 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
FOXN1O15353 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
FOXN1O15353 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
FOXN1O15353 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.34■■□□□ 1.81
FOXN1O15353 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
FOXN1O15353 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
FOXN1O15353 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
FOXN1O15353 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
FOXN1O15353 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.33■■□□□ 1.81
FOXN1O15353 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
FOXN1O15353 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.33■■□□□ 1.81
FOXN1O15353 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.33■■□□□ 1.81
FOXN1O15353 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
FOXN1O15353 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.33■■□□□ 1.8
FOXN1O15353 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.8
FOXN1O15353 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.32■■□□□ 1.8
FOXN1O15353 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.32■■□□□ 1.8
FOXN1O15353 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
FOXN1O15353 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.32■■□□□ 1.8
FOXN1O15353 RPS2P52-201ENST00000469610 820 ntBASIC26.32■■□□□ 1.8
FOXN1O15353 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
FOXN1O15353 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.32■■□□□ 1.8
FOXN1O15353 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26.32■■□□□ 1.8
FOXN1O15353 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC26.32■■□□□ 1.8
FOXN1O15353 SMUG1P1-201ENST00000590640 811 ntBASIC26.32■■□□□ 1.8
FOXN1O15353 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
FOXN1O15353 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.32■■□□□ 1.8
FOXN1O15353 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
FOXN1O15353 AC004812.2-201ENST00000611079 2094 ntBASIC26.32■■□□□ 1.8
FOXN1O15353 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.31■■□□□ 1.8
FOXN1O15353 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
FOXN1O15353 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
FOXN1O15353 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.31■■□□□ 1.8
FOXN1O15353 KRT18P29-201ENST00000397031 1267 ntBASIC26.31■■□□□ 1.8
FOXN1O15353 POU5F1P3-201ENST00000428824 1078 ntBASIC26.31■■□□□ 1.8
FOXN1O15353 GUSBP6-202ENST00000438529 1198 ntBASIC26.31■■□□□ 1.8
FOXN1O15353 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC26.31■■□□□ 1.8
FOXN1O15353 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC26.31■■□□□ 1.8
FOXN1O15353 AL050303.2-201ENST00000619798 666 ntBASIC26.31■■□□□ 1.8
FOXN1O15353 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.31■■□□□ 1.8
FOXN1O15353 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.31■■□□□ 1.8
FOXN1O15353 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
FOXN1O15353 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.3■■□□□ 1.8
FOXN1O15353 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
FOXN1O15353 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
FOXN1O15353 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.3■■□□□ 1.8
FOXN1O15353 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.3■■□□□ 1.8
FOXN1O15353 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.3■■□□□ 1.8
FOXN1O15353 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
FOXN1O15353 PRORSD1P-201ENST00000295112 541 ntBASIC26.3■■□□□ 1.8
FOXN1O15353 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.3■■□□□ 1.8
FOXN1O15353 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.3■■□□□ 1.8
FOXN1O15353 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.3■■□□□ 1.8
FOXN1O15353 AC004854.2-201ENST00000608450 1441 ntBASIC26.3■■□□□ 1.8
FOXN1O15353 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
FOXN1O15353 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
FOXN1O15353 HLA-L-211ENST00000482052 1765 ntBASIC26.29■■□□□ 1.8
FOXN1O15353 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
FOXN1O15353 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.29■■□□□ 1.8
FOXN1O15353 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.29■■□□□ 1.8
FOXN1O15353 RGMA-211ENST00000557420 989 ntTSL 3 BASIC26.29■■□□□ 1.8
FOXN1O15353 MDK-213ENST00000617138 635 ntTSL 2 BASIC26.29■■□□□ 1.8
FOXN1O15353 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
FOXN1O15353 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
FOXN1O15353 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
FOXN1O15353 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
FOXN1O15353 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.28■■□□□ 1.8
FOXN1O15353 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
FOXN1O15353 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.28■■□□□ 1.8
FOXN1O15353 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
FOXN1O15353 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.28■■□□□ 1.8
FOXN1O15353 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
FOXN1O15353 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
FOXN1O15353 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
FOXN1O15353 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FOXN1O15353 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FOXN1O15353 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FOXN1O15353 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FOXN1O15353 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
FOXN1O15353 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FOXN1O15353 AL596275.1-201ENST00000423464 877 ntBASIC26.27■■□□□ 1.8
FOXN1O15353 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.27■■□□□ 1.8
FOXN1O15353 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.27■■□□□ 1.8
FOXN1O15353 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.27■■□□□ 1.8
FOXN1O15353 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
FOXN1O15353 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FOXN1O15353 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FOXN1O15353 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
FOXN1O15353 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FOXN1O15353 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
FOXN1O15353 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
FOXN1O15353 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.26■■□□□ 1.79
FOXN1O15353 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.26■■□□□ 1.79
FOXN1O15353 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms