Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.87■■□□□ 1.09
H3BM21 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.87■■□□□ 1.09
H3BM21 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
H3BM21 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
H3BM21 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
H3BM21 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
H3BM21 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.86■■□□□ 1.09
H3BM21 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
H3BM21 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
H3BM21 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.86■■□□□ 1.09
H3BM21 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.86■■□□□ 1.09
H3BM21 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.86■■□□□ 1.09
H3BM21 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.86■■□□□ 1.09
H3BM21 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
H3BM21 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
H3BM21 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.85■■□□□ 1.09
H3BM21 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.85■■□□□ 1.09
H3BM21 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.85■■□□□ 1.09
H3BM21 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.85■■□□□ 1.09
H3BM21 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.85■■□□□ 1.09
H3BM21 AL354811.1-201ENST00000610286 706 ntBASIC21.85■■□□□ 1.09
H3BM21 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.85■■□□□ 1.09
H3BM21 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
H3BM21 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
H3BM21 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
H3BM21 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.84■■□□□ 1.09
H3BM21 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
H3BM21 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
H3BM21 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
H3BM21 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
H3BM21 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
H3BM21 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.84■■□□□ 1.09
H3BM21 AC012414.1-201ENST00000556676 535 ntBASIC21.84■■□□□ 1.09
H3BM21 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
H3BM21 DUSP8P5-201ENST00000422884 1815 ntBASIC21.84■■□□□ 1.09
H3BM21 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
H3BM21 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.84■■□□□ 1.09
H3BM21 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
H3BM21 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
H3BM21 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.83■■□□□ 1.09
H3BM21 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
H3BM21 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.83■■□□□ 1.09
H3BM21 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
H3BM21 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.83■■□□□ 1.09
H3BM21 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
H3BM21 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
H3BM21 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
H3BM21 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.83■■□□□ 1.09
H3BM21 AC027612.3-201ENST00000413684 1047 ntBASIC21.83■■□□□ 1.09
H3BM21 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.83■■□□□ 1.09
H3BM21 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
H3BM21 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.83■■□□□ 1.09
H3BM21 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
H3BM21 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
H3BM21 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
H3BM21 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.82■■□□□ 1.08
H3BM21 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
H3BM21 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
H3BM21 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
H3BM21 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.82■■□□□ 1.08
H3BM21 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
H3BM21 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.82■■□□□ 1.08
H3BM21 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.82■■□□□ 1.08
H3BM21 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
H3BM21 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
H3BM21 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
H3BM21 AC010525.1-201ENST00000585559 441 ntBASIC21.82■■□□□ 1.08
H3BM21 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
H3BM21 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
H3BM21 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
H3BM21 DUSP8P3-201ENST00000399571 1760 ntBASIC21.82■■□□□ 1.08
H3BM21 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
H3BM21 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
H3BM21 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.81■■□□□ 1.08
H3BM21 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.81■■□□□ 1.08
H3BM21 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
H3BM21 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.81■■□□□ 1.08
H3BM21 AP005435.1-201ENST00000529293 1178 ntBASIC21.81■■□□□ 1.08
H3BM21 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
H3BM21 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
H3BM21 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
H3BM21 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
H3BM21 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.81■■□□□ 1.08
H3BM21 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.81■■□□□ 1.08
H3BM21 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
H3BM21 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
H3BM21 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
H3BM21 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.8■■□□□ 1.08
H3BM21 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
H3BM21 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
H3BM21 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
H3BM21 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms