Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.06■□□□□ 0.8
ZC3H12DA2A288 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H12DA2A288 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ZC3H12DA2A288 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ZC3H12DA2A288 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H12DA2A288 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.06■□□□□ 0.8
ZC3H12DA2A288 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H12DA2A288 MIR4466-201ENST00000606121 54 ntBASIC20.06■□□□□ 0.8
ZC3H12DA2A288 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H12DA2A288 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
ZC3H12DA2A288 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.06■□□□□ 0.8
ZC3H12DA2A288 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
ZC3H12DA2A288 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3H12DA2A288 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.05■□□□□ 0.8
ZC3H12DA2A288 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.05■□□□□ 0.8
ZC3H12DA2A288 AC131281.2-201ENST00000520478 145 ntBASIC20.05■□□□□ 0.8
ZC3H12DA2A288 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
ZC3H12DA2A288 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3H12DA2A288 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3H12DA2A288 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ZC3H12DA2A288 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3H12DA2A288 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.05■□□□□ 0.8
ZC3H12DA2A288 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ZC3H12DA2A288 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3H12DA2A288 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.05■□□□□ 0.8
ZC3H12DA2A288 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.05■□□□□ 0.8
ZC3H12DA2A288 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.05■□□□□ 0.8
ZC3H12DA2A288 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.05■□□□□ 0.8
ZC3H12DA2A288 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZC3H12DA2A288 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZC3H12DA2A288 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ZC3H12DA2A288 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.04■□□□□ 0.8
ZC3H12DA2A288 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZC3H12DA2A288 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.04■□□□□ 0.8
ZC3H12DA2A288 AC006455.2-201ENST00000429931 906 ntBASIC20.04■□□□□ 0.8
ZC3H12DA2A288 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZC3H12DA2A288 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.04■□□□□ 0.8
ZC3H12DA2A288 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.04■□□□□ 0.8
ZC3H12DA2A288 AC099791.2-201ENST00000605725 427 ntBASIC20.04■□□□□ 0.8
ZC3H12DA2A288 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZC3H12DA2A288 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZC3H12DA2A288 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.04■□□□□ 0.8
ZC3H12DA2A288 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 AC131212.1-201ENST00000613771 668 ntBASIC20.03■□□□□ 0.8
ZC3H12DA2A288 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H12DA2A288 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H12DA2A288 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H12DA2A288 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ZC3H12DA2A288 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.02■□□□□ 0.8
ZC3H12DA2A288 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ZC3H12DA2A288 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H12DA2A288 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.02■□□□□ 0.8
ZC3H12DA2A288 AC009086.3-201ENST00000623486 1008 ntBASIC20.02■□□□□ 0.8
ZC3H12DA2A288 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H12DA2A288 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ZC3H12DA2A288 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H12DA2A288 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
ZC3H12DA2A288 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZC3H12DA2A288 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.02■□□□□ 0.79
ZC3H12DA2A288 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 SRD5A1P1-201ENST00000442297 786 ntBASIC20.01■□□□□ 0.79
ZC3H12DA2A288 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 AC241377.3-202ENST00000626088 1088 ntBASIC20.01■□□□□ 0.79
ZC3H12DA2A288 AC241585.3-202ENST00000628937 1088 ntBASIC20.01■□□□□ 0.79
ZC3H12DA2A288 AC245100.8-202ENST00000629247 1058 ntBASIC20.01■□□□□ 0.79
ZC3H12DA2A288 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
ZC3H12DA2A288 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms