Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TRDV1A0A1B0GX56 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRDV1A0A1B0GX56 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRDV1A0A1B0GX56 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.34■□□□□ 0.69
TRDV1A0A1B0GX56 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRDV1A0A1B0GX56 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRDV1A0A1B0GX56 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.34■□□□□ 0.69
TRDV1A0A1B0GX56 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRDV1A0A1B0GX56 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRDV1A0A1B0GX56 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRDV1A0A1B0GX56 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRDV1A0A1B0GX56 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.34■□□□□ 0.69
TRDV1A0A1B0GX56 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRDV1A0A1B0GX56 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TRDV1A0A1B0GX56 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRDV1A0A1B0GX56 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRDV1A0A1B0GX56 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRDV1A0A1B0GX56 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.33■□□□□ 0.68
TRDV1A0A1B0GX56 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRDV1A0A1B0GX56 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRDV1A0A1B0GX56 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRDV1A0A1B0GX56 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRDV1A0A1B0GX56 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRDV1A0A1B0GX56 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TRDV1A0A1B0GX56 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRDV1A0A1B0GX56 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 AC004448.1-201ENST00000458332 883 ntBASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.32■□□□□ 0.68
TRDV1A0A1B0GX56 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRDV1A0A1B0GX56 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRDV1A0A1B0GX56 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRDV1A0A1B0GX56 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRDV1A0A1B0GX56 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRDV1A0A1B0GX56 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.31■□□□□ 0.68
TRDV1A0A1B0GX56 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRDV1A0A1B0GX56 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRDV1A0A1B0GX56 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRDV1A0A1B0GX56 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.31■□□□□ 0.68
TRDV1A0A1B0GX56 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRDV1A0A1B0GX56 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRDV1A0A1B0GX56 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRDV1A0A1B0GX56 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRDV1A0A1B0GX56 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRDV1A0A1B0GX56 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.3■□□□□ 0.68
TRDV1A0A1B0GX56 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRDV1A0A1B0GX56 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRDV1A0A1B0GX56 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.3■□□□□ 0.68
TRDV1A0A1B0GX56 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TRDV1A0A1B0GX56 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.3■□□□□ 0.68
TRDV1A0A1B0GX56 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.3■□□□□ 0.68
TRDV1A0A1B0GX56 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.3■□□□□ 0.68
TRDV1A0A1B0GX56 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRDV1A0A1B0GX56 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRDV1A0A1B0GX56 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRDV1A0A1B0GX56 AL121603.2-201ENST00000557373 2117 ntBASIC19.3■□□□□ 0.68
TRDV1A0A1B0GX56 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRDV1A0A1B0GX56 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRDV1A0A1B0GX56 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRDV1A0A1B0GX56 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRDV1A0A1B0GX56 DUX4L9-201ENST00000449051 1259 ntBASIC19.29■□□□□ 0.68
TRDV1A0A1B0GX56 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRDV1A0A1B0GX56 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.29■□□□□ 0.68
TRDV1A0A1B0GX56 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRDV1A0A1B0GX56 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRDV1A0A1B0GX56 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRDV1A0A1B0GX56 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TRDV1A0A1B0GX56 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRDV1A0A1B0GX56 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.28■□□□□ 0.68
TRDV1A0A1B0GX56 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRDV1A0A1B0GX56 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRDV1A0A1B0GX56 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.28■□□□□ 0.68
TRDV1A0A1B0GX56 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.28■□□□□ 0.68
TRDV1A0A1B0GX56 AC022616.5-201ENST00000518796 181 ntBASIC19.28■□□□□ 0.68
TRDV1A0A1B0GX56 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRDV1A0A1B0GX56 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRDV1A0A1B0GX56 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRDV1A0A1B0GX56 LINC01960-201ENST00000563759 1884 ntBASIC19.28■□□□□ 0.68
TRDV1A0A1B0GX56 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRDV1A0A1B0GX56 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRDV1A0A1B0GX56 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRDV1A0A1B0GX56 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRDV1A0A1B0GX56 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRDV1A0A1B0GX56 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms