Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IGHV4-28A0A0C4DH34 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
IGHV4-28A0A0C4DH34 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 AP005435.1-201ENST00000529293 1178 ntBASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC15.84■□□□□ 0.13
IGHV4-28A0A0C4DH34 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
IGHV4-28A0A0C4DH34 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
IGHV4-28A0A0C4DH34 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
IGHV4-28A0A0C4DH34 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
IGHV4-28A0A0C4DH34 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
IGHV4-28A0A0C4DH34 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
IGHV4-28A0A0C4DH34 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
IGHV4-28A0A0C4DH34 RARRES2P6-201ENST00000567333 442 ntBASIC15.83■□□□□ 0.12
IGHV4-28A0A0C4DH34 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.83■□□□□ 0.12
IGHV4-28A0A0C4DH34 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGHV4-28A0A0C4DH34 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.83■□□□□ 0.12
IGHV4-28A0A0C4DH34 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
IGHV4-28A0A0C4DH34 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGHV4-28A0A0C4DH34 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
IGHV4-28A0A0C4DH34 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
IGHV4-28A0A0C4DH34 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
IGHV4-28A0A0C4DH34 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
IGHV4-28A0A0C4DH34 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms