Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 AC090877.2-201ENST00000558441 1738 ntBASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-6A0A0B4J262 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV8-6A0A0B4J262 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-6A0A0B4J262 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV8-6A0A0B4J262 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV8-6A0A0B4J262 ECEL1P1-201ENST00000373592 1742 ntBASIC16.06■□□□□ 0.16
TRAV8-6A0A0B4J262 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-6A0A0B4J262 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV8-6A0A0B4J262 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAV8-6A0A0B4J262 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAV8-6A0A0B4J262 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-6A0A0B4J262 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV8-6A0A0B4J262 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-6A0A0B4J262 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-6A0A0B4J262 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-6A0A0B4J262 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-6A0A0B4J262 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV8-6A0A0B4J262 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-6A0A0B4J262 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-6A0A0B4J262 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-6A0A0B4J262 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-6A0A0B4J262 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-6A0A0B4J262 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV8-6A0A0B4J262 MIR4508-201ENST00000584178 70 ntBASIC16.05■□□□□ 0.16
TRAV8-6A0A0B4J262 THA1P-201ENST00000590384 1145 ntBASIC16.05■□□□□ 0.16
TRAV8-6A0A0B4J262 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-6A0A0B4J262 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-6A0A0B4J262 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV8-6A0A0B4J262 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-6A0A0B4J262 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV8-6A0A0B4J262 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 KRT8P33-201ENST00000508125 1423 ntBASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-6A0A0B4J262 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-6A0A0B4J262 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV8-6A0A0B4J262 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-6A0A0B4J262 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-6A0A0B4J262 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-6A0A0B4J262 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRAV8-6A0A0B4J262 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-6A0A0B4J262 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV8-6A0A0B4J262 KRT18P24-201ENST00000344739 1156 ntBASIC16.02■□□□□ 0.16
TRAV8-6A0A0B4J262 PVT1_1.1-201ENST00000615125 194 ntBASIC16.02■□□□□ 0.16
TRAV8-6A0A0B4J262 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV8-6A0A0B4J262 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.15
TRAV8-6A0A0B4J262 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-6A0A0B4J262 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.15
TRAV8-6A0A0B4J262 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-6A0A0B4J262 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV8-6A0A0B4J262 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TRAV8-6A0A0B4J262 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.02■□□□□ 0.15
TRAV8-6A0A0B4J262 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms