Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
MTHFRP42898 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 SIGLEC20P-201ENST00000595243 1311 ntBASIC13.65□□□□□ -0.22
MTHFRP42898 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
MTHFRP42898 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
MTHFRP42898 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
MTHFRP42898 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
MTHFRP42898 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 RNA5SP407-201ENST00000410275 110 ntBASIC13.65□□□□□ -0.22
MTHFRP42898 AL627095.1-201ENST00000414775 321 ntBASIC13.65□□□□□ -0.22
MTHFRP42898 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC13.65□□□□□ -0.22
MTHFRP42898 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC13.65□□□□□ -0.22
MTHFRP42898 VTI1BP1-201ENST00000486325 700 ntBASIC13.65□□□□□ -0.22
MTHFRP42898 AC092284.1-201ENST00000511386 1289 ntBASIC13.65□□□□□ -0.22
MTHFRP42898 SNORD55-201ENST00000581525 80 ntBASIC13.65□□□□□ -0.22
MTHFRP42898 AC015818.3-201ENST00000583797 589 ntBASIC13.65□□□□□ -0.22
MTHFRP42898 OR4C3-202ENST00000611380 597 ntBASIC13.65□□□□□ -0.22
MTHFRP42898 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC13.65□□□□□ -0.22
MTHFRP42898 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC13.65□□□□□ -0.22
MTHFRP42898 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 AC244154.1-201ENST00000620148 1555 ntBASIC13.65□□□□□ -0.22
MTHFRP42898 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
MTHFRP42898 AC145098.2-201ENST00000623593 3026 ntBASIC13.65□□□□□ -0.22
MTHFRP42898 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.65□□□□□ -0.22
MTHFRP42898 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
MTHFRP42898 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MTHFRP42898 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
MTHFRP42898 AL731571.1-201ENST00000617058 5428 ntBASIC13.65□□□□□ -0.23
MTHFRP42898 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.65□□□□□ -0.23
MTHFRP42898 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
MTHFRP42898 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC13.64□□□□□ -0.23
MTHFRP42898 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.64□□□□□ -0.23
MTHFRP42898 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.64□□□□□ -0.23
MTHFRP42898 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
MTHFRP42898 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
MTHFRP42898 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
MTHFRP42898 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.64□□□□□ -0.23
MTHFRP42898 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC13.64□□□□□ -0.23
MTHFRP42898 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC13.64□□□□□ -0.23
MTHFRP42898 TFAM-201ENST00000373895 973 ntTSL 2 BASIC13.64□□□□□ -0.23
MTHFRP42898 AC004884.1-201ENST00000393647 319 ntBASIC13.64□□□□□ -0.23
MTHFRP42898 GSTM2P1-201ENST00000405166 654 ntBASIC13.64□□□□□ -0.23
MTHFRP42898 PRADC1P1-201ENST00000412317 525 ntBASIC13.64□□□□□ -0.23
MTHFRP42898 PHBP3-201ENST00000412562 819 ntBASIC13.64□□□□□ -0.23
MTHFRP42898 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC13.64□□□□□ -0.23
MTHFRP42898 AC131235.2-201ENST00000445553 1057 ntBASIC13.64□□□□□ -0.23
MTHFRP42898 ASS1P9-201ENST00000513426 1236 ntBASIC13.64□□□□□ -0.23
MTHFRP42898 AC105424.1-201ENST00000514583 209 ntBASIC13.64□□□□□ -0.23
MTHFRP42898 RN7SKP195-201ENST00000516587 303 ntBASIC13.64□□□□□ -0.23
MTHFRP42898 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC13.64□□□□□ -0.23
MTHFRP42898 AL033381.2-201ENST00000603854 732 ntBASIC13.64□□□□□ -0.23
MTHFRP42898 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC13.64□□□□□ -0.23
MTHFRP42898 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.64□□□□□ -0.23
MTHFRP42898 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
MTHFRP42898 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.64□□□□□ -0.23
MTHFRP42898 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
MTHFRP42898 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MTHFRP42898 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
MTHFRP42898 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms