Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ALX3O95076 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
ALX3O95076 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC11.72□□□□□ -0.53
ALX3O95076 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
ALX3O95076 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC11.72□□□□□ -0.53
ALX3O95076 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 AC068896.1-201ENST00000494792 3422 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 PDE9A-207ENST00000398224 1671 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 PDE9A-210ENST00000398229 1684 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
ALX3O95076 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 ARHGAP25-203ENST00000409220 2939 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 PDXDC2P-206ENST00000534700 1315 ntBASIC11.72□□□□□ -0.53
ALX3O95076 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC11.72□□□□□ -0.53
ALX3O95076 TEKT4P2-202ENST00000559466 1312 ntBASIC11.72□□□□□ -0.53
ALX3O95076 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC11.72□□□□□ -0.53
ALX3O95076 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 MIR33B-201ENST00000385104 96 ntBASIC11.72□□□□□ -0.53
ALX3O95076 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 OR2W2P-201ENST00000406313 909 ntBASIC11.72□□□□□ -0.53
ALX3O95076 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC11.72□□□□□ -0.53
ALX3O95076 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC11.72□□□□□ -0.53
ALX3O95076 FTLP1-201ENST00000449155 526 ntBASIC11.72□□□□□ -0.53
ALX3O95076 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC11.72□□□□□ -0.53
ALX3O95076 AC008267.1-201ENST00000474858 1069 ntBASIC11.72□□□□□ -0.53
ALX3O95076 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC11.72□□□□□ -0.53
ALX3O95076 RPL18AP8-201ENST00000486071 528 ntBASIC11.72□□□□□ -0.53
ALX3O95076 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
ALX3O95076 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 AL137779.3-201ENST00000553295 729 ntBASIC11.72□□□□□ -0.53
ALX3O95076 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC11.72□□□□□ -0.53
ALX3O95076 MBP-238ENST00000580402 915 ntTSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC11.72□□□□□ -0.53
ALX3O95076 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
ALX3O95076 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 AC092171.5-201ENST00000608012 942 ntBASIC11.72□□□□□ -0.53
ALX3O95076 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC11.72□□□□□ -0.53
ALX3O95076 Z82244.1-201ENST00000631502 840 ntBASIC11.72□□□□□ -0.53
ALX3O95076 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 PUM3-202ENST00000397885 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALX3O95076 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC11.72□□□□□ -0.53
ALX3O95076 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
ALX3O95076 C2-211ENST00000469372 1906 ntTSL 2 BASIC11.72□□□□□ -0.53
ALX3O95076 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
ALX3O95076 CDKL2-201ENST00000307465 2565 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
ALX3O95076 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 TRPC4-206ENST00000379705 4059 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 UBE2L3-201ENST00000342192 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
ALX3O95076 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC11.71□□□□□ -0.53
ALX3O95076 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
ALX3O95076 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
ALX3O95076 MTFR1L-201ENST00000374300 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALX3O95076 TPI1P3-201ENST00000335020 740 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms