Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 AC087392.5-201ENST00000612517 489 ntBASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 DLX5-201ENST00000222598 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 DGKZP1-201ENST00000378718 2776 ntBASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 RN7SKP109-201ENST00000410592 316 ntBASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 AC114781.1-201ENST00000450559 1028 ntBASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 AC104212.2-201ENST00000478813 628 ntBASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 AC245884.6-201ENST00000515672 1067 ntBASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 VENTXP3-201ENST00000546480 773 ntBASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 MT3-202ENST00000561640 514 ntTSL 3 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 AC103810.3-201ENST00000583567 96 ntBASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 AC103810.10-201ENST00000606504 343 ntBASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 NBPF17P-201ENST00000401087 2119 ntBASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
POLR2J2Q9GZM3 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 U3.5-201ENST00000363448 216 ntBASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 RPL10-203ENST00000406022 748 ntTSL 3 BASIC12.16□□□□□ -0.46
POLR2J2Q9GZM3 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms