Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC11.08□□□□□ -0.64
GAPDHP04406 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GAPDHP04406 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC11.08□□□□□ -0.64
GAPDHP04406 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC11.08□□□□□ -0.64
GAPDHP04406 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GAPDHP04406 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC11.08□□□□□ -0.64
GAPDHP04406 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
GAPDHP04406 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
GAPDHP04406 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GAPDHP04406 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
GAPDHP04406 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
GAPDHP04406 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GAPDHP04406 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
GAPDHP04406 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
GAPDHP04406 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GAPDHP04406 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
GAPDHP04406 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
GAPDHP04406 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
GAPDHP04406 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GAPDHP04406 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
GAPDHP04406 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
GAPDHP04406 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
GAPDHP04406 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
GAPDHP04406 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
GAPDHP04406 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 ATF4P4-201ENST00000393544 1930 ntBASIC11.07□□□□□ -0.64
GAPDHP04406 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
GAPDHP04406 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC11.07□□□□□ -0.64
GAPDHP04406 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC11.07□□□□□ -0.64
GAPDHP04406 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
GAPDHP04406 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
GAPDHP04406 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 AC091046.1-201ENST00000331871 207 ntBASIC11.07□□□□□ -0.64
GAPDHP04406 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 UFM1-202ENST00000379649 846 ntTSL 4 BASIC11.07□□□□□ -0.64
GAPDHP04406 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC11.07□□□□□ -0.64
GAPDHP04406 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 AC041040.1-201ENST00000425197 460 ntBASIC11.07□□□□□ -0.64
GAPDHP04406 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC11.07□□□□□ -0.64
GAPDHP04406 FGFR3P1-201ENST00000449999 601 ntBASIC11.07□□□□□ -0.64
GAPDHP04406 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC11.07□□□□□ -0.64
GAPDHP04406 RNA5SP406-201ENST00000516106 112 ntBASIC11.07□□□□□ -0.64
GAPDHP04406 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 PRKXP1-201ENST00000561423 1122 ntBASIC11.07□□□□□ -0.64
GAPDHP04406 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC11.07□□□□□ -0.64
GAPDHP04406 MBP-238ENST00000580402 915 ntTSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 RN7SL470P-201ENST00000583069 259 ntBASIC11.07□□□□□ -0.64
GAPDHP04406 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC11.07□□□□□ -0.64
GAPDHP04406 MIR8071-1-201ENST00000616769 65 ntBASIC11.07□□□□□ -0.64
GAPDHP04406 MIR8071-2-201ENST00000616772 65 ntBASIC11.07□□□□□ -0.64
GAPDHP04406 ST5-261ENST00000626808 1071 ntTSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC11.07□□□□□ -0.64
GAPDHP04406 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC11.07□□□□□ -0.64
GAPDHP04406 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC11.07□□□□□ -0.64
GAPDHP04406 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC11.07□□□□□ -0.64
GAPDHP04406 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC11.07□□□□□ -0.64
GAPDHP04406 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
GAPDHP04406 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
GAPDHP04406 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC11.07□□□□□ -0.64
GAPDHP04406 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC11.07□□□□□ -0.64
GAPDHP04406 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
GAPDHP04406 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC11.07□□□□□ -0.64
GAPDHP04406 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
GAPDHP04406 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
GAPDHP04406 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GAPDHP04406 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms