Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 CADM3-202ENST00000368125 3745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALX3O95076 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALX3O95076 MCM5-202ENST00000382011 2402 ntTSL 2 BASIC11.79□□□□□ -0.52
ALX3O95076 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC11.79□□□□□ -0.52
ALX3O95076 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALX3O95076 LINC00452-202ENST00000609661 2896 ntTSL 5 BASIC11.79□□□□□ -0.52
ALX3O95076 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALX3O95076 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC11.79□□□□□ -0.52
ALX3O95076 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALX3O95076 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALX3O95076 CEP63-204ENST00000383229 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALX3O95076 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALX3O95076 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALX3O95076 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC11.79□□□□□ -0.52
ALX3O95076 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALX3O95076 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ALX3O95076 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC11.78□□□□□ -0.52
ALX3O95076 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 SPRY2-202ENST00000377104 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 AL157791.1-201ENST00000553667 1699 ntBASIC11.78□□□□□ -0.52
ALX3O95076 DDC-212ENST00000615193 1674 ntTSL 3 BASIC11.78□□□□□ -0.52
ALX3O95076 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
ALX3O95076 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ALX3O95076 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
ALX3O95076 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
ALX3O95076 AC010336.1-201ENST00000539278 4739 ntBASIC11.78□□□□□ -0.52
ALX3O95076 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 LINC02052-202ENST00000427914 2285 ntTSL 2 BASIC11.78□□□□□ -0.52
ALX3O95076 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
ALX3O95076 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC11.78□□□□□ -0.52
ALX3O95076 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC11.78□□□□□ -0.52
ALX3O95076 SERF2-206ENST00000409291 807 ntTSL 3 BASIC11.78□□□□□ -0.52
ALX3O95076 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC11.78□□□□□ -0.52
ALX3O95076 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC11.78□□□□□ -0.52
ALX3O95076 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
ALX3O95076 POU5F1P2-201ENST00000521750 823 ntBASIC11.78□□□□□ -0.52
ALX3O95076 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
ALX3O95076 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
ALX3O95076 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC11.78□□□□□ -0.52
ALX3O95076 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC11.78□□□□□ -0.52
ALX3O95076 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC11.78□□□□□ -0.52
ALX3O95076 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC11.78□□□□□ -0.52
ALX3O95076 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
ALX3O95076 MIR6769A-201ENST00000617340 73 ntBASIC11.78□□□□□ -0.52
ALX3O95076 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC11.78□□□□□ -0.52
ALX3O95076 ABBA01031663.1-201ENST00000635630 790 ntBASIC11.78□□□□□ -0.52
ALX3O95076 HLA-C-210ENST00000640219 976 ntBASIC11.78□□□□□ -0.52
ALX3O95076 ZNF461-204ENST00000588268 2584 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 STAC2-201ENST00000333461 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC11.78□□□□□ -0.52
ALX3O95076 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
ALX3O95076 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC11.78□□□□□ -0.52
ALX3O95076 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC11.78□□□□□ -0.52
ALX3O95076 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC11.78□□□□□ -0.52
ALX3O95076 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
ALX3O95076 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALX3O95076 PEG10-203ENST00000488574 2587 ntTSL 2 BASIC11.77□□□□□ -0.52
ALX3O95076 MED24-203ENST00000394127 3456 ntTSL 2 BASIC11.77□□□□□ -0.52
ALX3O95076 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
ALX3O95076 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
ALX3O95076 AL021392.1-201ENST00000426112 2949 ntTSL 2 BASIC11.77□□□□□ -0.52
ALX3O95076 GABBR1-201ENST00000355973 3506 ntTSL 2 BASIC11.77□□□□□ -0.52
ALX3O95076 AC138028.6-201ENST00000616106 1482 ntBASIC11.77□□□□□ -0.52
ALX3O95076 GOLGA8UP-201ENST00000527159 1755 ntBASIC11.77□□□□□ -0.52
ALX3O95076 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ALX3O95076 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ALX3O95076 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC11.77□□□□□ -0.52
ALX3O95076 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ALX3O95076 AC008158.1-201ENST00000578759 3668 ntBASIC11.77□□□□□ -0.53
ALX3O95076 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ALX3O95076 CNBD2-204ENST00000489667 2531 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ALX3O95076 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ALX3O95076 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
ALX3O95076 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ALX3O95076 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ALX3O95076 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ALX3O95076 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ALX3O95076 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms