Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL162615.1-201ENST00000429893 1653 ntBASIC8.37□□□□□ -1.07
VPS13DQ5THJ4 AL606760.3-201ENST00000569869 3591 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 OVCH2-203ENST00000612000 1730 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 PTRH2-201ENST00000393038 901 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 HTR3D-203ENST00000428798 1215 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 HTR3D-204ENST00000453435 1043 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 RN7SL394P-201ENST00000480997 291 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AC091965.1-201ENST00000512406 440 ntTSL 3 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 POU5F1-205ENST00000512818 1233 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 MEG3-223ENST00000524131 721 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 KRTAP4-9-202ENST00000617453 558 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 RHOXF1P3-202ENST00000639347 851 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AC079880.1-201ENST00000603040 2046 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AC079781.5-202ENST00000641784 3743 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 PRR19-202ENST00000499536 1956 ntAPPRIS P2 TSL 2 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AC008555.2-201ENST00000600348 1714 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 JPT2-202ENST00000382710 962 ntTSL 2 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AC092587.1-201ENST00000410042 669 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 LSP1P3-201ENST00000449530 208 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AP000926.2-201ENST00000469983 358 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 NDUFB5-205ENST00000472629 744 ntTSL 3 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AC136632.1-201ENST00000477964 591 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 CR383656.9-201ENST00000546860 1178 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AC008870.3-201ENST00000566143 641 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AC004134.1-201ENST00000587835 225 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 LDAH-213ENST00000626491 1179 ntTSL 2 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 PSMD4-202ENST00000368884 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 PAK3-206ENST00000425146 2477 ntAPPRIS P3 TSL 2 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 CHST9-201ENST00000580774 2033 ntTSL 3 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 SOHLH2-201ENST00000317764 1909 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AC091181.1-201ENST00000623762 2098 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 KIR3DL2-202ENST00000326321 1877 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 C12orf45-201ENST00000280749 459 ntTSL 3 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 SARNP-201ENST00000336133 926 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 ITPKB-IT1-201ENST00000412918 746 ntTSL 2 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 LINC00313-206ENST00000441283 448 ntTSL 3 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 B3GALT5-AS1-204ENST00000489821 1159 ntTSL 2 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 GM2AP1-201ENST00000491450 521 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AC126614.1-201ENST00000547552 548 ntTSL 4 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 C17orf62-206ENST00000577436 1079 ntTSL 3 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 IPO7-208ENST00000630083 195 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 SAMMSON-221ENST00000641715 1546 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 HAND2-204ENST00000621866 1337 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AC005531.1-201ENST00000520729 1360 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 TYRL-201ENST00000243152 441 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AC026461.4-201ENST00000379816 242 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 ST3GAL6-207ENST00000468553 715 ntTSL 3 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 TAGLN3-206ENST00000486460 920 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 PHLDB1-217ENST00000530708 874 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 SNRPD2-207ENST00000588599 805 ntTSL 3 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AC008750.6-201ENST00000598746 322 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AC020728.1-201ENST00000605749 1216 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 AL133396.2-201ENST00000617466 397 ntBASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 IGLV2-8-201ENST00000620395 517 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS13DQ5THJ4 VIPAS39-206ENST00000553888 2934 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 HOPX-211ENST00000554144 1672 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 FAM213A-201ENST00000372181 2058 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS13DQ5THJ4 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms