Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
ZIC3O60481 RPS18P9-201ENST00000482817 460 ntBASIC11.82□□□□□ -0.52
ZIC3O60481 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 HNRNPA1P55-201ENST00000505935 955 ntBASIC11.82□□□□□ -0.52
ZIC3O60481 BCRP4-201ENST00000506079 804 ntBASIC11.82□□□□□ -0.52
ZIC3O60481 MIR2278-201ENST00000516344 96 ntBASIC11.82□□□□□ -0.52
ZIC3O60481 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 AC021755.2-201ENST00000559022 461 ntTSL 5 BASIC11.82□□□□□ -0.52
ZIC3O60481 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC11.82□□□□□ -0.52
ZIC3O60481 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC11.82□□□□□ -0.52
ZIC3O60481 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC11.82□□□□□ -0.52
ZIC3O60481 AC136475.7-201ENST00000602949 592 ntBASIC11.82□□□□□ -0.52
ZIC3O60481 PRR20FP-201ENST00000603320 180 ntBASIC11.82□□□□□ -0.52
ZIC3O60481 AC092535.4-201ENST00000609548 397 ntBASIC11.82□□□□□ -0.52
ZIC3O60481 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC11.82□□□□□ -0.52
ZIC3O60481 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC11.82□□□□□ -0.52
ZIC3O60481 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
ZIC3O60481 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
ZIC3O60481 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
ZIC3O60481 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ZIC3O60481 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC11.82□□□□□ -0.52
ZIC3O60481 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
ZIC3O60481 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
ZIC3O60481 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
ZIC3O60481 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC11.81□□□□□ -0.52
ZIC3O60481 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 DDX11L2-201ENST00000437401 1398 ntBASIC11.81□□□□□ -0.52
ZIC3O60481 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.81□□□□□ -0.52
ZIC3O60481 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ZIC3O60481 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
ZIC3O60481 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
ZIC3O60481 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
ZIC3O60481 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC11.81□□□□□ -0.52
ZIC3O60481 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
ZIC3O60481 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC11.81□□□□□ -0.52
ZIC3O60481 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC11.81□□□□□ -0.52
ZIC3O60481 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC11.81□□□□□ -0.52
ZIC3O60481 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC11.81□□□□□ -0.52
ZIC3O60481 TULP3P1-202ENST00000453253 1291 ntBASIC11.81□□□□□ -0.52
ZIC3O60481 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 AC104117.1-201ENST00000517817 900 ntBASIC11.81□□□□□ -0.52
ZIC3O60481 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 GRAMD4P6-201ENST00000556999 244 ntBASIC11.81□□□□□ -0.52
ZIC3O60481 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 BMF-206ENST00000558774 671 ntTSL 3 BASIC11.81□□□□□ -0.52
ZIC3O60481 AL590235.1-201ENST00000564650 861 ntBASIC11.81□□□□□ -0.52
ZIC3O60481 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC11.81□□□□□ -0.52
ZIC3O60481 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC11.81□□□□□ -0.52
ZIC3O60481 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC11.81□□□□□ -0.52
ZIC3O60481 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC11.81□□□□□ -0.52
ZIC3O60481 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC11.81□□□□□ -0.52
ZIC3O60481 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
ZIC3O60481 AL591424.3-201ENST00000614278 872 ntBASIC11.81□□□□□ -0.52
ZIC3O60481 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC11.81□□□□□ -0.52
ZIC3O60481 AC020922.4-201ENST00000621389 339 ntBASIC11.81□□□□□ -0.52
ZIC3O60481 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms