Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CGNL1Q0VF96 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 LINC00567-201ENST00000569854 3409 ntBASIC17.76■□□□□ 0.43
CGNL1Q0VF96 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 P2RX6P-202ENST00000450626 357 ntBASIC17.76■□□□□ 0.43
CGNL1Q0VF96 AC067942.1-202ENST00000471756 1057 ntBASIC17.76■□□□□ 0.43
CGNL1Q0VF96 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 AC106782.5-201ENST00000616011 337 ntBASIC17.76■□□□□ 0.43
CGNL1Q0VF96 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 HAL-202ENST00000538703 2637 ntTSL 2 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 PPP1R32-203ENST00000432063 1472 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 AL050341.2-201ENST00000567508 1541 ntBASIC17.76■□□□□ 0.43
CGNL1Q0VF96 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CGNL1Q0VF96 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 SLC25A6P1-201ENST00000412123 775 ntBASIC17.75■□□□□ 0.43
CGNL1Q0VF96 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 AC010997.1-201ENST00000447646 350 ntBASIC17.75■□□□□ 0.43
CGNL1Q0VF96 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 AC104115.1-201ENST00000484005 623 ntBASIC17.75■□□□□ 0.43
CGNL1Q0VF96 AF186996.6-201ENST00000485294 149 ntBASIC17.75■□□□□ 0.43
CGNL1Q0VF96 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 AC021755.2-201ENST00000559022 461 ntTSL 5 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 AP003969.2-201ENST00000623739 2275 ntBASIC17.75■□□□□ 0.43
CGNL1Q0VF96 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 AC008806.1-201ENST00000624962 2443 ntBASIC17.75■□□□□ 0.43
CGNL1Q0VF96 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 LINC02465-203ENST00000513875 1777 ntTSL 5 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 HSPA8P9-201ENST00000485881 1943 ntBASIC17.75■□□□□ 0.43
CGNL1Q0VF96 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CGNL1Q0VF96 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms