Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 MIR6746-201ENST00000620971 63 ntBASIC11.66□□□□□ -0.54
NPIPB4C9JG80 SNX12-206ENST00000622259 661 ntTSL 5 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 MAGEB10-201ENST00000356790 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
NPIPB4C9JG80 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 MIPEPP1-201ENST00000413533 2027 ntBASIC11.65□□□□□ -0.54
NPIPB4C9JG80 HRC-203ENST00000595625 2044 ntTSL 5 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 AHCYP7-201ENST00000560847 1308 ntBASIC11.65□□□□□ -0.54
NPIPB4C9JG80 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 STRCP1-201ENST00000509801 5328 ntBASIC11.65□□□□□ -0.54
NPIPB4C9JG80 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 IL1RN-204ENST00000409052 1903 ntTSL 5 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 RN7SL8P-201ENST00000461771 266 ntBASIC11.65□□□□□ -0.54
NPIPB4C9JG80 AC092903.1-201ENST00000466506 262 ntBASIC11.65□□□□□ -0.54
NPIPB4C9JG80 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 HNRNPA1P5-201ENST00000558213 966 ntBASIC11.65□□□□□ -0.54
NPIPB4C9JG80 GOLGA2P7-209ENST00000560408 745 ntBASIC11.65□□□□□ -0.54
NPIPB4C9JG80 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 MIR5091-201ENST00000578707 93 ntBASIC11.65□□□□□ -0.54
NPIPB4C9JG80 TYMSP2-201ENST00000589501 424 ntBASIC11.65□□□□□ -0.54
NPIPB4C9JG80 AC104440.1-201ENST00000605010 343 ntBASIC11.65□□□□□ -0.54
NPIPB4C9JG80 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 KRT8P38-201ENST00000441370 1430 ntBASIC11.65□□□□□ -0.54
NPIPB4C9JG80 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
NPIPB4C9JG80 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
NPIPB4C9JG80 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC11.65□□□□□ -0.55
NPIPB4C9JG80 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
NPIPB4C9JG80 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
NPIPB4C9JG80 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC11.65□□□□□ -0.55
NPIPB4C9JG80 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
NPIPB4C9JG80 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
NPIPB4C9JG80 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 CLUHP8-201ENST00000547527 1485 ntBASIC11.64□□□□□ -0.55
NPIPB4C9JG80 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 SNX1-211ENST00000560829 1869 ntTSL 5 BASIC11.64□□□□□ -0.55
NPIPB4C9JG80 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms