Protein–RNA interactions for Protein: Q9Y5F6

PCDHGC5, Protocadherin gamma-C5, humanhuman

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC5Q9Y5F6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
PCDHGC5Q9Y5F6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGC5Q9Y5F6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.25■■□□□ 1.47
PCDHGC5Q9Y5F6 AC241377.3-202ENST00000626088 1088 ntBASIC24.25■■□□□ 1.47
PCDHGC5Q9Y5F6 AC241585.3-202ENST00000628937 1088 ntBASIC24.25■■□□□ 1.47
PCDHGC5Q9Y5F6 AC245100.8-202ENST00000629247 1058 ntBASIC24.25■■□□□ 1.47
PCDHGC5Q9Y5F6 RARRES2P11-201ENST00000635158 484 ntBASIC24.25■■□□□ 1.47
PCDHGC5Q9Y5F6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGC5Q9Y5F6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGC5Q9Y5F6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.25■■□□□ 1.47
PCDHGC5Q9Y5F6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGC5Q9Y5F6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
PCDHGC5Q9Y5F6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PCDHGC5Q9Y5F6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGC5Q9Y5F6 BX842568.3-201ENST00000418104 571 ntBASIC24.24■■□□□ 1.47
PCDHGC5Q9Y5F6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHGC5Q9Y5F6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.24■■□□□ 1.47
PCDHGC5Q9Y5F6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGC5Q9Y5F6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDHGC5Q9Y5F6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGC5Q9Y5F6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.24■■□□□ 1.47
PCDHGC5Q9Y5F6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHGC5Q9Y5F6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDHGC5Q9Y5F6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGC5Q9Y5F6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGC5Q9Y5F6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHGC5Q9Y5F6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDHGC5Q9Y5F6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGC5Q9Y5F6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGC5Q9Y5F6 AC022517.1-201ENST00000592429 346 ntBASIC24.23■■□□□ 1.47
PCDHGC5Q9Y5F6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGC5Q9Y5F6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHGC5Q9Y5F6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGC5Q9Y5F6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGC5Q9Y5F6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
PCDHGC5Q9Y5F6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGC5Q9Y5F6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGC5Q9Y5F6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGC5Q9Y5F6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGC5Q9Y5F6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGC5Q9Y5F6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PCDHGC5Q9Y5F6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.22■■□□□ 1.47
PCDHGC5Q9Y5F6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGC5Q9Y5F6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGC5Q9Y5F6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGC5Q9Y5F6 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.22■■□□□ 1.47
PCDHGC5Q9Y5F6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.22■■□□□ 1.47
PCDHGC5Q9Y5F6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGC5Q9Y5F6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
PCDHGC5Q9Y5F6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGC5Q9Y5F6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDHGC5Q9Y5F6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.21■■□□□ 1.47
PCDHGC5Q9Y5F6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.21■■□□□ 1.47
PCDHGC5Q9Y5F6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDHGC5Q9Y5F6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDHGC5Q9Y5F6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.2■■□□□ 1.47
PCDHGC5Q9Y5F6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHGC5Q9Y5F6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDHGC5Q9Y5F6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGC5Q9Y5F6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
PCDHGC5Q9Y5F6 KRT18P5-201ENST00000436075 1291 ntBASIC24.2■■□□□ 1.46
PCDHGC5Q9Y5F6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGC5Q9Y5F6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
PCDHGC5Q9Y5F6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 AC034268.1-201ENST00000441047 882 ntBASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 AC092437.1-201ENST00000624794 1048 ntBASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 AC233723.2-201ENST00000623798 2106 ntBASIC24.19■■□□□ 1.46
PCDHGC5Q9Y5F6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 pRNA.6-201ENST00000610482 90 ntBASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 pRNA.5-201ENST00000612139 90 ntBASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 pRNA.11-201ENST00000618423 90 ntBASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 pRNA.13-201ENST00000619112 90 ntBASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
PCDHGC5Q9Y5F6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms