Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHB13Q9Y5F0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.33■■□□□ 1.49
PCDHB13Q9Y5F0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.33■■□□□ 1.49
PCDHB13Q9Y5F0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
PCDHB13Q9Y5F0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHB13Q9Y5F0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.33■■□□□ 1.49
PCDHB13Q9Y5F0 AC012676.1-201ENST00000574705 1949 ntBASIC24.33■■□□□ 1.49
PCDHB13Q9Y5F0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDHB13Q9Y5F0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB13Q9Y5F0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB13Q9Y5F0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHB13Q9Y5F0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHB13Q9Y5F0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHB13Q9Y5F0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB13Q9Y5F0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB13Q9Y5F0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB13Q9Y5F0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB13Q9Y5F0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB13Q9Y5F0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB13Q9Y5F0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
PCDHB13Q9Y5F0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHB13Q9Y5F0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHB13Q9Y5F0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.31■■□□□ 1.48
PCDHB13Q9Y5F0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHB13Q9Y5F0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDHB13Q9Y5F0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHB13Q9Y5F0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDHB13Q9Y5F0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDHB13Q9Y5F0 AC011298.3-201ENST00000615796 283 ntBASIC24.31■■□□□ 1.48
PCDHB13Q9Y5F0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PCDHB13Q9Y5F0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHB13Q9Y5F0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB13Q9Y5F0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB13Q9Y5F0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB13Q9Y5F0 UNC93B3-201ENST00000308076 687 ntBASIC24.3■■□□□ 1.48
PCDHB13Q9Y5F0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB13Q9Y5F0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB13Q9Y5F0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB13Q9Y5F0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
PCDHB13Q9Y5F0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDHB13Q9Y5F0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHB13Q9Y5F0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHB13Q9Y5F0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHB13Q9Y5F0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDHB13Q9Y5F0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHB13Q9Y5F0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHB13Q9Y5F0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
PCDHB13Q9Y5F0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHB13Q9Y5F0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.29■■□□□ 1.48
PCDHB13Q9Y5F0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHB13Q9Y5F0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
PCDHB13Q9Y5F0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHB13Q9Y5F0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB13Q9Y5F0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB13Q9Y5F0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB13Q9Y5F0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB13Q9Y5F0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDHB13Q9Y5F0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDHB13Q9Y5F0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
PCDHB13Q9Y5F0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.28■■□□□ 1.48
PCDHB13Q9Y5F0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB13Q9Y5F0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB13Q9Y5F0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB13Q9Y5F0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB13Q9Y5F0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB13Q9Y5F0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PCDHB13Q9Y5F0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB13Q9Y5F0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDHB13Q9Y5F0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB13Q9Y5F0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB13Q9Y5F0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB13Q9Y5F0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHB13Q9Y5F0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB13Q9Y5F0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB13Q9Y5F0 AC136469.2-201ENST00000623944 1028 ntBASIC24.27■■□□□ 1.48
PCDHB13Q9Y5F0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHB13Q9Y5F0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDHB13Q9Y5F0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB13Q9Y5F0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHB13Q9Y5F0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB13Q9Y5F0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB13Q9Y5F0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.26■■□□□ 1.47
PCDHB13Q9Y5F0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB13Q9Y5F0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB13Q9Y5F0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB13Q9Y5F0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB13Q9Y5F0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.26■■□□□ 1.47
PCDHB13Q9Y5F0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB13Q9Y5F0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDHB13Q9Y5F0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB13Q9Y5F0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
PCDHB13Q9Y5F0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB13Q9Y5F0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
PCDHB13Q9Y5F0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB13Q9Y5F0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB13Q9Y5F0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDHB13Q9Y5F0 AC096631.2-201ENST00000436136 790 ntBASIC24.25■■□□□ 1.47
PCDHB13Q9Y5F0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB13Q9Y5F0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB13Q9Y5F0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms