Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC136469.2-201ENST00000623944 1028 ntBASIC20.14■□□□□ 0.81
RPH3AQ9Y2J0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPH3AQ9Y2J0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPH3AQ9Y2J0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPH3AQ9Y2J0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 EDA-201ENST00000338901 1233 ntBASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 AC142381.2-201ENST00000566120 298 ntBASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 AL499627.2-201ENST00000606283 725 ntBASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 AL355001.2-201ENST00000620617 1191 ntBASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RPH3AQ9Y2J0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 MIR5787-201ENST00000611784 55 ntBASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 DUSP8P3-201ENST00000399571 1760 ntBASIC20.11■□□□□ 0.81
RPH3AQ9Y2J0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 AC004687.1-201ENST00000579003 1625 ntBASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 AF213884.3-201ENST00000563833 479 ntBASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 AC008764.7-201ENST00000593779 1081 ntBASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 AL031432.3-201ENST00000607698 485 ntBASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPH3AQ9Y2J0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPH3AQ9Y2J0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPH3AQ9Y2J0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPH3AQ9Y2J0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.09■□□□□ 0.81
RPH3AQ9Y2J0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPH3AQ9Y2J0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPH3AQ9Y2J0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPH3AQ9Y2J0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.09■□□□□ 0.81
RPH3AQ9Y2J0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPH3AQ9Y2J0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPH3AQ9Y2J0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPH3AQ9Y2J0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.09■□□□□ 0.81
RPH3AQ9Y2J0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPH3AQ9Y2J0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.08■□□□□ 0.81
RPH3AQ9Y2J0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RPH3AQ9Y2J0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPH3AQ9Y2J0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPH3AQ9Y2J0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.08■□□□□ 0.81
RPH3AQ9Y2J0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPH3AQ9Y2J0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPH3AQ9Y2J0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.08■□□□□ 0.81
RPH3AQ9Y2J0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPH3AQ9Y2J0 AP001330.3-201ENST00000520123 633 ntBASIC20.08■□□□□ 0.81
RPH3AQ9Y2J0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.08■□□□□ 0.81
RPH3AQ9Y2J0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.08■□□□□ 0.81
RPH3AQ9Y2J0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms