Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPA1Q9UND3 TSPY26P-201ENST00000476365 1326 ntBASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 ANOS2P-203ENST00000472227 1816 ntBASIC20.27■□□□□ 0.84
NPIPA1Q9UND3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NPIPA1Q9UND3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
NPIPA1Q9UND3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NPIPA1Q9UND3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
NPIPA1Q9UND3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.27■□□□□ 0.83
NPIPA1Q9UND3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NPIPA1Q9UND3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NPIPA1Q9UND3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NPIPA1Q9UND3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPIPA1Q9UND3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.26■□□□□ 0.83
NPIPA1Q9UND3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPIPA1Q9UND3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NPIPA1Q9UND3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.26■□□□□ 0.83
NPIPA1Q9UND3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPIPA1Q9UND3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.26■□□□□ 0.83
NPIPA1Q9UND3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPIPA1Q9UND3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPIPA1Q9UND3 AC133637.1-201ENST00000624115 1537 ntBASIC20.24■□□□□ 0.83
NPIPA1Q9UND3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.24■□□□□ 0.83
NPIPA1Q9UND3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.24■□□□□ 0.83
NPIPA1Q9UND3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPIPA1Q9UND3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
NPIPA1Q9UND3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPIPA1Q9UND3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPIPA1Q9UND3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPIPA1Q9UND3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.23■□□□□ 0.83
NPIPA1Q9UND3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPA1Q9UND3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPIPA1Q9UND3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPIPA1Q9UND3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPIPA1Q9UND3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms