Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.27■■□□□ 1
PCDHGB4Q9UN71 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
PCDHGB4Q9UN71 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.27■■□□□ 1
PCDHGB4Q9UN71 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.27■■□□□ 1
PCDHGB4Q9UN71 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.27■■□□□ 1
PCDHGB4Q9UN71 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB4Q9UN71 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.27■■□□□ 1
PCDHGB4Q9UN71 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB4Q9UN71 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB4Q9UN71 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHGB4Q9UN71 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB4Q9UN71 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB4Q9UN71 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB4Q9UN71 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB4Q9UN71 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB4Q9UN71 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
PCDHGB4Q9UN71 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB4Q9UN71 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB4Q9UN71 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PCDHGB4Q9UN71 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB4Q9UN71 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB4Q9UN71 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB4Q9UN71 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB4Q9UN71 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB4Q9UN71 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGB4Q9UN71 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PCDHGB4Q9UN71 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB4Q9UN71 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB4Q9UN71 AC103834.1-201ENST00000520383 144 ntBASIC21.25■□□□□ 0.99
PCDHGB4Q9UN71 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHGB4Q9UN71 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHGB4Q9UN71 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB4Q9UN71 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGB4Q9UN71 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.25■□□□□ 0.99
PCDHGB4Q9UN71 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB4Q9UN71 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB4Q9UN71 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB4Q9UN71 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 AC103724.3-201ENST00000564481 992 ntBASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB4Q9UN71 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 AC079630.1-202ENST00000618127 1840 ntBASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDHGB4Q9UN71 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB4Q9UN71 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB4Q9UN71 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB4Q9UN71 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB4Q9UN71 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB4Q9UN71 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms