Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
UBQLN4Q9NRR5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
UBQLN4Q9NRR5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.29■□□□□ 0.84
UBQLN4Q9NRR5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.29■□□□□ 0.84
UBQLN4Q9NRR5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBQLN4Q9NRR5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.28■□□□□ 0.84
UBQLN4Q9NRR5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBQLN4Q9NRR5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBQLN4Q9NRR5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
UBQLN4Q9NRR5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
UBQLN4Q9NRR5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBQLN4Q9NRR5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.28■□□□□ 0.84
UBQLN4Q9NRR5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBQLN4Q9NRR5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBQLN4Q9NRR5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN4Q9NRR5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
UBQLN4Q9NRR5 ESRRAP2-201ENST00000418437 1549 ntBASIC20.27■□□□□ 0.84
UBQLN4Q9NRR5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN4Q9NRR5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN4Q9NRR5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN4Q9NRR5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN4Q9NRR5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN4Q9NRR5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN4Q9NRR5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
UBQLN4Q9NRR5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
UBQLN4Q9NRR5 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.27■□□□□ 0.84
UBQLN4Q9NRR5 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.27■□□□□ 0.84
UBQLN4Q9NRR5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN4Q9NRR5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN4Q9NRR5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
UBQLN4Q9NRR5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
UBQLN4Q9NRR5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 SERBP1P1-201ENST00000396021 1160 ntBASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN4Q9NRR5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN4Q9NRR5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
UBQLN4Q9NRR5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
UBQLN4Q9NRR5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.25■□□□□ 0.83
UBQLN4Q9NRR5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.25■□□□□ 0.83
UBQLN4Q9NRR5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN4Q9NRR5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.25■□□□□ 0.83
UBQLN4Q9NRR5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN4Q9NRR5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
UBQLN4Q9NRR5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN4Q9NRR5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN4Q9NRR5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN4Q9NRR5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
UBQLN4Q9NRR5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
UBQLN4Q9NRR5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
UBQLN4Q9NRR5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.24■□□□□ 0.83
UBQLN4Q9NRR5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN4Q9NRR5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN4Q9NRR5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN4Q9NRR5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN4Q9NRR5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN4Q9NRR5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.24■□□□□ 0.83
UBQLN4Q9NRR5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.24■□□□□ 0.83
UBQLN4Q9NRR5 AC011298.3-201ENST00000615796 283 ntBASIC20.24■□□□□ 0.83
UBQLN4Q9NRR5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN4Q9NRR5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.24■□□□□ 0.83
UBQLN4Q9NRR5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
UBQLN4Q9NRR5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
UBQLN4Q9NRR5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.23■□□□□ 0.83
UBQLN4Q9NRR5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.23■□□□□ 0.83
UBQLN4Q9NRR5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN4Q9NRR5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
UBQLN4Q9NRR5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.23■□□□□ 0.83
UBQLN4Q9NRR5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.23■□□□□ 0.83
UBQLN4Q9NRR5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN4Q9NRR5 LINC01960-201ENST00000563759 1884 ntBASIC20.22■□□□□ 0.83
UBQLN4Q9NRR5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN4Q9NRR5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.22■□□□□ 0.83
UBQLN4Q9NRR5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.22■□□□□ 0.83
UBQLN4Q9NRR5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.22■□□□□ 0.83
UBQLN4Q9NRR5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN4Q9NRR5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
UBQLN4Q9NRR5 AC233723.2-201ENST00000623798 2106 ntBASIC20.22■□□□□ 0.83
UBQLN4Q9NRR5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN4Q9NRR5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN4Q9NRR5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.22■□□□□ 0.83
UBQLN4Q9NRR5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.22■□□□□ 0.83
UBQLN4Q9NRR5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN4Q9NRR5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.22■□□□□ 0.83
UBQLN4Q9NRR5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN4Q9NRR5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN4Q9NRR5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN4Q9NRR5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms