Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.37■□□□□ 0.53
SSBP3Q9BWW4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.37■□□□□ 0.53
SSBP3Q9BWW4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.37■□□□□ 0.53
SSBP3Q9BWW4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSBP3Q9BWW4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.37■□□□□ 0.53
SSBP3Q9BWW4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.37■□□□□ 0.53
SSBP3Q9BWW4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSBP3Q9BWW4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SSBP3Q9BWW4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSBP3Q9BWW4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSBP3Q9BWW4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSBP3Q9BWW4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SSBP3Q9BWW4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.36■□□□□ 0.53
SSBP3Q9BWW4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.36■□□□□ 0.53
SSBP3Q9BWW4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSBP3Q9BWW4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.36■□□□□ 0.53
SSBP3Q9BWW4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.36■□□□□ 0.53
SSBP3Q9BWW4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SSBP3Q9BWW4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SSBP3Q9BWW4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSBP3Q9BWW4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSBP3Q9BWW4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSBP3Q9BWW4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.35■□□□□ 0.53
SSBP3Q9BWW4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSBP3Q9BWW4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.35■□□□□ 0.53
SSBP3Q9BWW4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSBP3Q9BWW4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSBP3Q9BWW4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSBP3Q9BWW4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SSBP3Q9BWW4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSBP3Q9BWW4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSBP3Q9BWW4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.34■□□□□ 0.53
SSBP3Q9BWW4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSBP3Q9BWW4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSBP3Q9BWW4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.34■□□□□ 0.53
SSBP3Q9BWW4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSBP3Q9BWW4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSBP3Q9BWW4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSBP3Q9BWW4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSBP3Q9BWW4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSBP3Q9BWW4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
SSBP3Q9BWW4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.33■□□□□ 0.53
SSBP3Q9BWW4 ANOS2P-203ENST00000472227 1816 ntBASIC18.33■□□□□ 0.53
SSBP3Q9BWW4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSBP3Q9BWW4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
SSBP3Q9BWW4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.33■□□□□ 0.53
SSBP3Q9BWW4 IRS3P-201ENST00000223076 1006 ntBASIC18.33■□□□□ 0.52
SSBP3Q9BWW4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSBP3Q9BWW4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSBP3Q9BWW4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.33■□□□□ 0.52
SSBP3Q9BWW4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SSBP3Q9BWW4 AC010525.1-201ENST00000585559 441 ntBASIC18.33■□□□□ 0.52
SSBP3Q9BWW4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSBP3Q9BWW4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSBP3Q9BWW4 AC004687.1-201ENST00000579003 1625 ntBASIC18.33■□□□□ 0.52
SSBP3Q9BWW4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSBP3Q9BWW4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SSBP3Q9BWW4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SSBP3Q9BWW4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSBP3Q9BWW4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 TSPY26P-201ENST00000476365 1326 ntBASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 IGHV3-19-201ENST00000521488 291 ntBASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSBP3Q9BWW4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.31■□□□□ 0.52
SSBP3Q9BWW4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSBP3Q9BWW4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSBP3Q9BWW4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.31■□□□□ 0.52
SSBP3Q9BWW4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSBP3Q9BWW4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.31■□□□□ 0.52
SSBP3Q9BWW4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SSBP3Q9BWW4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSBP3Q9BWW4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
SSBP3Q9BWW4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSBP3Q9BWW4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSBP3Q9BWW4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.31■□□□□ 0.52
SSBP3Q9BWW4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.31■□□□□ 0.52
SSBP3Q9BWW4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SSBP3Q9BWW4 AC092068.2-201ENST00000590491 1708 ntBASIC18.3■□□□□ 0.52
SSBP3Q9BWW4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.3■□□□□ 0.52
SSBP3Q9BWW4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SSBP3Q9BWW4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSBP3Q9BWW4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.3■□□□□ 0.52
SSBP3Q9BWW4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.3■□□□□ 0.52
SSBP3Q9BWW4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms