Protein–RNA interactions for Protein: Q96C92

SDCCAG3, Serologically defined colon cancer antigen 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3Q96C92 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDCCAG3Q96C92 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 MIR4281-201ENST00000580852 62 ntBASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SDCCAG3Q96C92 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDCCAG3Q96C92 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.1■□□□□ 0.97
SDCCAG3Q96C92 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
SDCCAG3Q96C92 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SDCCAG3Q96C92 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDCCAG3Q96C92 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.1■□□□□ 0.97
SDCCAG3Q96C92 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.1■□□□□ 0.97
SDCCAG3Q96C92 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDCCAG3Q96C92 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDCCAG3Q96C92 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SDCCAG3Q96C92 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SDCCAG3Q96C92 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDCCAG3Q96C92 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDCCAG3Q96C92 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDCCAG3Q96C92 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDCCAG3Q96C92 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SDCCAG3Q96C92 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDCCAG3Q96C92 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDCCAG3Q96C92 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDCCAG3Q96C92 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.09■□□□□ 0.97
SDCCAG3Q96C92 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SDCCAG3Q96C92 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDCCAG3Q96C92 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDCCAG3Q96C92 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SDCCAG3Q96C92 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.08■□□□□ 0.97
SDCCAG3Q96C92 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDCCAG3Q96C92 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDCCAG3Q96C92 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDCCAG3Q96C92 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDCCAG3Q96C92 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SDCCAG3Q96C92 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.08■□□□□ 0.97
SDCCAG3Q96C92 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.08■□□□□ 0.97
SDCCAG3Q96C92 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SDCCAG3Q96C92 AC242852.2-201ENST00000615738 1807 ntBASIC21.08■□□□□ 0.96
SDCCAG3Q96C92 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.07■□□□□ 0.96
SDCCAG3Q96C92 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.07■□□□□ 0.96
SDCCAG3Q96C92 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDCCAG3Q96C92 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDCCAG3Q96C92 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.07■□□□□ 0.96
SDCCAG3Q96C92 MIR638-201ENST00000385237 100 ntBASIC21.07■□□□□ 0.96
SDCCAG3Q96C92 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.07■□□□□ 0.96
SDCCAG3Q96C92 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.07■□□□□ 0.96
SDCCAG3Q96C92 AC131281.2-201ENST00000520478 145 ntBASIC21.07■□□□□ 0.96
SDCCAG3Q96C92 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.07■□□□□ 0.96
SDCCAG3Q96C92 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDCCAG3Q96C92 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SDCCAG3Q96C92 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SDCCAG3Q96C92 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.07■□□□□ 0.96
SDCCAG3Q96C92 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 AL139246.5-201ENST00000606645 996 ntBASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 AC010997.5-201ENST00000609182 354 ntBASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDCCAG3Q96C92 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.05■□□□□ 0.96
SDCCAG3Q96C92 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.05■□□□□ 0.96
SDCCAG3Q96C92 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.05■□□□□ 0.96
SDCCAG3Q96C92 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDCCAG3Q96C92 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SDCCAG3Q96C92 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDCCAG3Q96C92 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.05■□□□□ 0.96
SDCCAG3Q96C92 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDCCAG3Q96C92 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SDCCAG3Q96C92 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDCCAG3Q96C92 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SDCCAG3Q96C92 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDCCAG3Q96C92 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.04■□□□□ 0.96
SDCCAG3Q96C92 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDCCAG3Q96C92 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms