Protein–RNA interactions for Protein: Q92947

GCDH, Glutaryl-CoA dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCDHQ92947 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GCDHQ92947 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
GCDHQ92947 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.3■□□□□ 0.68
GCDHQ92947 RPS2P7-201ENST00000447334 885 ntBASIC19.3■□□□□ 0.68
GCDHQ92947 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.3■□□□□ 0.68
GCDHQ92947 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.3■□□□□ 0.68
GCDHQ92947 AC090877.2-201ENST00000558441 1738 ntBASIC19.3■□□□□ 0.68
GCDHQ92947 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GCDHQ92947 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GCDHQ92947 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
GCDHQ92947 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.3■□□□□ 0.68
GCDHQ92947 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GCDHQ92947 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GCDHQ92947 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
GCDHQ92947 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GCDHQ92947 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
GCDHQ92947 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GCDHQ92947 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GCDHQ92947 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
GCDHQ92947 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GCDHQ92947 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GCDHQ92947 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.29■□□□□ 0.68
GCDHQ92947 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GCDHQ92947 SLC25A24-204ENST00000569674 2357 ntBASIC19.29■□□□□ 0.68
GCDHQ92947 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.29■□□□□ 0.68
GCDHQ92947 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
GCDHQ92947 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
GCDHQ92947 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GCDHQ92947 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.29■□□□□ 0.68
GCDHQ92947 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GCDHQ92947 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GCDHQ92947 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.28■□□□□ 0.68
GCDHQ92947 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GCDHQ92947 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.28■□□□□ 0.68
GCDHQ92947 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
GCDHQ92947 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
GCDHQ92947 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.28■□□□□ 0.68
GCDHQ92947 PKD1P6-201ENST00000343738 4769 ntBASIC19.28■□□□□ 0.68
GCDHQ92947 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
GCDHQ92947 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCDHQ92947 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCDHQ92947 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
GCDHQ92947 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
GCDHQ92947 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GCDHQ92947 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.27■□□□□ 0.68
GCDHQ92947 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GCDHQ92947 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCDHQ92947 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GCDHQ92947 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GCDHQ92947 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.27■□□□□ 0.67
GCDHQ92947 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GCDHQ92947 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GCDHQ92947 MIR638-201ENST00000385237 100 ntBASIC19.26■□□□□ 0.67
GCDHQ92947 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.26■□□□□ 0.67
GCDHQ92947 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCDHQ92947 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.26■□□□□ 0.67
GCDHQ92947 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCDHQ92947 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GCDHQ92947 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCDHQ92947 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GCDHQ92947 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCDHQ92947 AC139530.1-201ENST00000575312 1977 ntBASIC19.25■□□□□ 0.67
GCDHQ92947 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCDHQ92947 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GCDHQ92947 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.25■□□□□ 0.67
GCDHQ92947 UNC93B8-201ENST00000511903 705 ntBASIC19.25■□□□□ 0.67
GCDHQ92947 AC022616.5-201ENST00000518796 181 ntBASIC19.25■□□□□ 0.67
GCDHQ92947 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
GCDHQ92947 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.25■□□□□ 0.67
GCDHQ92947 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCDHQ92947 FBXW4P1-201ENST00000426721 2239 ntBASIC19.25■□□□□ 0.67
GCDHQ92947 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCDHQ92947 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCDHQ92947 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCDHQ92947 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCDHQ92947 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCDHQ92947 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 TSPY9P-201ENST00000440215 945 ntBASIC19.24■□□□□ 0.67
GCDHQ92947 TSPY11P-201ENST00000442607 1045 ntBASIC19.24■□□□□ 0.67
GCDHQ92947 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.24■□□□□ 0.67
GCDHQ92947 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.24■□□□□ 0.67
GCDHQ92947 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
GCDHQ92947 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCDHQ92947 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GCDHQ92947 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms