Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP3S1Q92572 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.42■□□□□ 0.7
AP3S1Q92572 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
AP3S1Q92572 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP3S1Q92572 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP3S1Q92572 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.42■□□□□ 0.7
AP3S1Q92572 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.42■□□□□ 0.7
AP3S1Q92572 AC010542.4-201ENST00000563151 1910 ntBASIC19.42■□□□□ 0.7
AP3S1Q92572 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP3S1Q92572 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP3S1Q92572 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP3S1Q92572 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.42■□□□□ 0.7
AP3S1Q92572 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.42■□□□□ 0.7
AP3S1Q92572 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP3S1Q92572 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP3S1Q92572 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.41■□□□□ 0.7
AP3S1Q92572 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP3S1Q92572 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.41■□□□□ 0.7
AP3S1Q92572 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.41■□□□□ 0.7
AP3S1Q92572 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP3S1Q92572 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AP3S1Q92572 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AP3S1Q92572 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP3S1Q92572 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP3S1Q92572 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AP3S1Q92572 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S1Q92572 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S1Q92572 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S1Q92572 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S1Q92572 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S1Q92572 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S1Q92572 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
AP3S1Q92572 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S1Q92572 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S1Q92572 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S1Q92572 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S1Q92572 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP3S1Q92572 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
AP3S1Q92572 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
AP3S1Q92572 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
AP3S1Q92572 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
AP3S1Q92572 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.39■□□□□ 0.7
AP3S1Q92572 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP3S1Q92572 AC005229.4-201ENST00000610085 2198 ntBASIC19.39■□□□□ 0.69
AP3S1Q92572 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP3S1Q92572 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.39■□□□□ 0.69
AP3S1Q92572 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP3S1Q92572 AC092296.2-201ENST00000589470 999 ntBASIC19.39■□□□□ 0.69
AP3S1Q92572 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP3S1Q92572 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP3S1Q92572 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.39■□□□□ 0.69
AP3S1Q92572 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP3S1Q92572 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP3S1Q92572 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP3S1Q92572 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
AP3S1Q92572 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AP3S1Q92572 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3S1Q92572 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3S1Q92572 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3S1Q92572 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AP3S1Q92572 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
AP3S1Q92572 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
AP3S1Q92572 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
AP3S1Q92572 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
AP3S1Q92572 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3S1Q92572 AC087742.1-201ENST00000575880 1738 ntBASIC19.38■□□□□ 0.69
AP3S1Q92572 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
AP3S1Q92572 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.38■□□□□ 0.69
AP3S1Q92572 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
AP3S1Q92572 CR559946.2-201ENST00000623684 991 ntBASIC19.38■□□□□ 0.69
AP3S1Q92572 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S1Q92572 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S1Q92572 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S1Q92572 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S1Q92572 AL353803.4-201ENST00000565882 1934 ntBASIC19.37■□□□□ 0.69
AP3S1Q92572 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S1Q92572 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S1Q92572 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S1Q92572 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
AP3S1Q92572 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
AP3S1Q92572 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S1Q92572 AC092667.1-201ENST00000434301 2586 ntBASIC19.37■□□□□ 0.69
AP3S1Q92572 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.37■□□□□ 0.69
AP3S1Q92572 ECEL1P2-201ENST00000461596 1295 ntBASIC19.37■□□□□ 0.69
AP3S1Q92572 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S1Q92572 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S1Q92572 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S1Q92572 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S1Q92572 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S1Q92572 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3S1Q92572 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
AP3S1Q92572 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AP3S1Q92572 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
AP3S1Q92572 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3S1Q92572 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3S1Q92572 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AP3S1Q92572 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
AP3S1Q92572 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3S1Q92572 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3S1Q92572 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms