Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21■□□□□ 0.95
RNF217Q8TC41 AC010980.1-201ENST00000587192 1142 ntBASIC21■□□□□ 0.95
RNF217Q8TC41 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21■□□□□ 0.95
RNF217Q8TC41 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF217Q8TC41 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF217Q8TC41 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF217Q8TC41 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RNF217Q8TC41 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF217Q8TC41 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF217Q8TC41 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF217Q8TC41 AC022616.5-201ENST00000518796 181 ntBASIC20.99■□□□□ 0.95
RNF217Q8TC41 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF217Q8TC41 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF217Q8TC41 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF217Q8TC41 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF217Q8TC41 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RNF217Q8TC41 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF217Q8TC41 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF217Q8TC41 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF217Q8TC41 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF217Q8TC41 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF217Q8TC41 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RNF217Q8TC41 AC011551.1-201ENST00000614101 683 ntBASIC20.98■□□□□ 0.95
RNF217Q8TC41 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF217Q8TC41 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RNF217Q8TC41 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF217Q8TC41 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF217Q8TC41 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF217Q8TC41 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF217Q8TC41 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF217Q8TC41 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF217Q8TC41 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF217Q8TC41 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF217Q8TC41 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF217Q8TC41 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF217Q8TC41 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RNF217Q8TC41 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF217Q8TC41 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF217Q8TC41 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF217Q8TC41 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF217Q8TC41 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF217Q8TC41 AL022069.1-201ENST00000568025 1636 ntBASIC20.97■□□□□ 0.95
RNF217Q8TC41 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF217Q8TC41 AC012354.3-201ENST00000623734 483 ntBASIC20.97■□□□□ 0.95
RNF217Q8TC41 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF217Q8TC41 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF217Q8TC41 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF217Q8TC41 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF217Q8TC41 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
RNF217Q8TC41 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RNF217Q8TC41 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF217Q8TC41 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RNF217Q8TC41 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF217Q8TC41 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF217Q8TC41 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF217Q8TC41 AL033527.3-201ENST00000566366 1196 ntBASIC20.96■□□□□ 0.95
RNF217Q8TC41 AC019171.1-201ENST00000601251 1056 ntBASIC20.96■□□□□ 0.95
RNF217Q8TC41 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF217Q8TC41 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF217Q8TC41 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF217Q8TC41 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RNF217Q8TC41 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF217Q8TC41 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF217Q8TC41 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF217Q8TC41 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
RNF217Q8TC41 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
RNF217Q8TC41 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF217Q8TC41 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF217Q8TC41 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF217Q8TC41 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF217Q8TC41 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF217Q8TC41 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF217Q8TC41 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RNF217Q8TC41 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF217Q8TC41 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF217Q8TC41 AC074183.2-201ENST00000623112 922 ntBASIC20.95■□□□□ 0.94
RNF217Q8TC41 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RNF217Q8TC41 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF217Q8TC41 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF217Q8TC41 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF217Q8TC41 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RNF217Q8TC41 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF217Q8TC41 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
RNF217Q8TC41 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF217Q8TC41 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RNF217Q8TC41 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF217Q8TC41 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF217Q8TC41 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF217Q8TC41 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF217Q8TC41 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF217Q8TC41 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF217Q8TC41 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF217Q8TC41 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF217Q8TC41 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF217Q8TC41 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF217Q8TC41 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF217Q8TC41 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF217Q8TC41 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RNF217Q8TC41 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF217Q8TC41 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms