Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
C11orf88Q6PI97 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
C11orf88Q6PI97 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C11orf88Q6PI97 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
C11orf88Q6PI97 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.06■□□□□ 0.64
C11orf88Q6PI97 AC022616.5-201ENST00000518796 181 ntBASIC19.06■□□□□ 0.64
C11orf88Q6PI97 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
C11orf88Q6PI97 AL031848.2-201ENST00000607670 837 ntBASIC19.06■□□□□ 0.64
C11orf88Q6PI97 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
C11orf88Q6PI97 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C11orf88Q6PI97 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C11orf88Q6PI97 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.06■□□□□ 0.64
C11orf88Q6PI97 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C11orf88Q6PI97 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.05■□□□□ 0.64
C11orf88Q6PI97 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C11orf88Q6PI97 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
C11orf88Q6PI97 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.05■□□□□ 0.64
C11orf88Q6PI97 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C11orf88Q6PI97 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
C11orf88Q6PI97 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
C11orf88Q6PI97 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C11orf88Q6PI97 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.05■□□□□ 0.64
C11orf88Q6PI97 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
C11orf88Q6PI97 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C11orf88Q6PI97 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.05■□□□□ 0.64
C11orf88Q6PI97 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C11orf88Q6PI97 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C11orf88Q6PI97 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
C11orf88Q6PI97 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
C11orf88Q6PI97 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C11orf88Q6PI97 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.04■□□□□ 0.64
C11orf88Q6PI97 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C11orf88Q6PI97 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C11orf88Q6PI97 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
C11orf88Q6PI97 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C11orf88Q6PI97 PVT1_1.1-201ENST00000615125 194 ntBASIC19.04■□□□□ 0.64
C11orf88Q6PI97 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C11orf88Q6PI97 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C11orf88Q6PI97 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C11orf88Q6PI97 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
C11orf88Q6PI97 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.03■□□□□ 0.64
C11orf88Q6PI97 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C11orf88Q6PI97 AC242852.2-201ENST00000615738 1807 ntBASIC19.03■□□□□ 0.64
C11orf88Q6PI97 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.03■□□□□ 0.64
C11orf88Q6PI97 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C11orf88Q6PI97 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.03■□□□□ 0.64
C11orf88Q6PI97 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C11orf88Q6PI97 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.02■□□□□ 0.64
C11orf88Q6PI97 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C11orf88Q6PI97 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
C11orf88Q6PI97 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
C11orf88Q6PI97 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C11orf88Q6PI97 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C11orf88Q6PI97 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C11orf88Q6PI97 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.02■□□□□ 0.64
C11orf88Q6PI97 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.02■□□□□ 0.64
C11orf88Q6PI97 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
C11orf88Q6PI97 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
C11orf88Q6PI97 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C11orf88Q6PI97 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.02■□□□□ 0.64
C11orf88Q6PI97 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
C11orf88Q6PI97 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.02■□□□□ 0.64
C11orf88Q6PI97 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.02■□□□□ 0.63
C11orf88Q6PI97 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
C11orf88Q6PI97 AL161729.1-201ENST00000604104 1402 ntBASIC19.01■□□□□ 0.63
C11orf88Q6PI97 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.01■□□□□ 0.63
C11orf88Q6PI97 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C11orf88Q6PI97 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
C11orf88Q6PI97 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C11orf88Q6PI97 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C11orf88Q6PI97 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
C11orf88Q6PI97 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C11orf88Q6PI97 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C11orf88Q6PI97 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.01■□□□□ 0.63
C11orf88Q6PI97 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
C11orf88Q6PI97 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
C11orf88Q6PI97 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
C11orf88Q6PI97 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C11orf88Q6PI97 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
C11orf88Q6PI97 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C11orf88Q6PI97 LONRF2P2-201ENST00000439212 571 ntBASIC19■□□□□ 0.63
C11orf88Q6PI97 AC103724.3-201ENST00000564481 992 ntBASIC19■□□□□ 0.63
C11orf88Q6PI97 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C11orf88Q6PI97 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19■□□□□ 0.63
C11orf88Q6PI97 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19■□□□□ 0.63
C11orf88Q6PI97 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C11orf88Q6PI97 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C11orf88Q6PI97 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C11orf88Q6PI97 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
C11orf88Q6PI97 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
C11orf88Q6PI97 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C11orf88Q6PI97 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C11orf88Q6PI97 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.98■□□□□ 0.63
C11orf88Q6PI97 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms