Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM60Q495X7 KRT18P11-201ENST00000435214 1283 ntBASIC24.49■■□□□ 1.51
TRIM60Q495X7 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.49■■□□□ 1.51
TRIM60Q495X7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.49■■□□□ 1.51
TRIM60Q495X7 AC142086.2-201ENST00000569753 217 ntBASIC24.49■■□□□ 1.51
TRIM60Q495X7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.49■■□□□ 1.51
TRIM60Q495X7 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.49■■□□□ 1.51
TRIM60Q495X7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
TRIM60Q495X7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.49■■□□□ 1.51
TRIM60Q495X7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
TRIM60Q495X7 AC144652.1-201ENST00000609974 1624 ntBASIC24.49■■□□□ 1.51
TRIM60Q495X7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM60Q495X7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM60Q495X7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM60Q495X7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
TRIM60Q495X7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM60Q495X7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM60Q495X7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.48■■□□□ 1.51
TRIM60Q495X7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM60Q495X7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.48■■□□□ 1.51
TRIM60Q495X7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.48■■□□□ 1.51
TRIM60Q495X7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.48■■□□□ 1.51
TRIM60Q495X7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.48■■□□□ 1.51
TRIM60Q495X7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.48■■□□□ 1.51
TRIM60Q495X7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.48■■□□□ 1.51
TRIM60Q495X7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM60Q495X7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
TRIM60Q495X7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM60Q495X7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM60Q495X7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.47■■□□□ 1.51
TRIM60Q495X7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.47■■□□□ 1.51
TRIM60Q495X7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM60Q495X7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM60Q495X7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM60Q495X7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
TRIM60Q495X7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.46■■□□□ 1.51
TRIM60Q495X7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM60Q495X7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM60Q495X7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
TRIM60Q495X7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TRIM60Q495X7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.45■■□□□ 1.5
TRIM60Q495X7 AC135731.1-201ENST00000569415 2548 ntBASIC24.45■■□□□ 1.5
TRIM60Q495X7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TRIM60Q495X7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
TRIM60Q495X7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TRIM60Q495X7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
TRIM60Q495X7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TRIM60Q495X7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.44■■□□□ 1.5
TRIM60Q495X7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.44■■□□□ 1.5
TRIM60Q495X7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.44■■□□□ 1.5
TRIM60Q495X7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRIM60Q495X7 AL050303.2-201ENST00000619798 666 ntBASIC24.44■■□□□ 1.5
TRIM60Q495X7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.44■■□□□ 1.5
TRIM60Q495X7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRIM60Q495X7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRIM60Q495X7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRIM60Q495X7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM60Q495X7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM60Q495X7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM60Q495X7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.43■■□□□ 1.5
TRIM60Q495X7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM60Q495X7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
TRIM60Q495X7 MFSD11-216ENST00000590393 1141 ntBASIC24.43■■□□□ 1.5
TRIM60Q495X7 AL121832.2-201ENST00000610979 668 ntBASIC24.43■■□□□ 1.5
TRIM60Q495X7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM60Q495X7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM60Q495X7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.43■■□□□ 1.5
TRIM60Q495X7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.43■■□□□ 1.5
TRIM60Q495X7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.42■■□□□ 1.5
TRIM60Q495X7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM60Q495X7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
TRIM60Q495X7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM60Q495X7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM60Q495X7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM60Q495X7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM60Q495X7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
TRIM60Q495X7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
TRIM60Q495X7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
TRIM60Q495X7 KRT18P6-201ENST00000555540 1265 ntBASIC24.42■■□□□ 1.5
TRIM60Q495X7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM60Q495X7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.42■■□□□ 1.5
TRIM60Q495X7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
TRIM60Q495X7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM60Q495X7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM60Q495X7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.42■■□□□ 1.5
TRIM60Q495X7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM60Q495X7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM60Q495X7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM60Q495X7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM60Q495X7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM60Q495X7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM60Q495X7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.41■■□□□ 1.5
TRIM60Q495X7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.41■■□□□ 1.5
TRIM60Q495X7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM60Q495X7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM60Q495X7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM60Q495X7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.4■■□□□ 1.5
TRIM60Q495X7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM60Q495X7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM60Q495X7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms