Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.72■□□□□ 0.91
EFNA3P52797 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EFNA3P52797 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
EFNA3P52797 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EFNA3P52797 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EFNA3P52797 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EFNA3P52797 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.71■□□□□ 0.91
EFNA3P52797 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EFNA3P52797 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.71■□□□□ 0.91
EFNA3P52797 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.71■□□□□ 0.91
EFNA3P52797 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EFNA3P52797 TSPY26P-201ENST00000476365 1326 ntBASIC20.71■□□□□ 0.91
EFNA3P52797 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
EFNA3P52797 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
EFNA3P52797 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.71■□□□□ 0.91
EFNA3P52797 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFNA3P52797 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFNA3P52797 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFNA3P52797 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.7■□□□□ 0.9
EFNA3P52797 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFNA3P52797 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFNA3P52797 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFNA3P52797 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
EFNA3P52797 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFNA3P52797 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFNA3P52797 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFNA3P52797 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.7■□□□□ 0.9
EFNA3P52797 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFNA3P52797 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
EFNA3P52797 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFNA3P52797 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFNA3P52797 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFNA3P52797 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.69■□□□□ 0.9
EFNA3P52797 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
EFNA3P52797 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFNA3P52797 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EFNA3P52797 RARRES2P6-201ENST00000567333 442 ntBASIC20.69■□□□□ 0.9
EFNA3P52797 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.69■□□□□ 0.9
EFNA3P52797 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.69■□□□□ 0.9
EFNA3P52797 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.69■□□□□ 0.9
EFNA3P52797 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFNA3P52797 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.69■□□□□ 0.9
EFNA3P52797 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
EFNA3P52797 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFNA3P52797 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
EFNA3P52797 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFNA3P52797 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
EFNA3P52797 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFNA3P52797 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFNA3P52797 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFNA3P52797 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
EFNA3P52797 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFNA3P52797 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFNA3P52797 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
EFNA3P52797 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.68■□□□□ 0.9
EFNA3P52797 IGHV3-19-201ENST00000521488 291 ntBASIC20.68■□□□□ 0.9
EFNA3P52797 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
EFNA3P52797 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.68■□□□□ 0.9
EFNA3P52797 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFNA3P52797 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFNA3P52797 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFNA3P52797 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EFNA3P52797 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFNA3P52797 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFNA3P52797 DUSP8P3-201ENST00000399571 1760 ntBASIC20.67■□□□□ 0.9
EFNA3P52797 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
EFNA3P52797 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.67■□□□□ 0.9
EFNA3P52797 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFNA3P52797 IRS3P-201ENST00000223076 1006 ntBASIC20.67■□□□□ 0.9
EFNA3P52797 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.67■□□□□ 0.9
EFNA3P52797 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.67■□□□□ 0.9
EFNA3P52797 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.67■□□□□ 0.9
EFNA3P52797 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.67■□□□□ 0.9
EFNA3P52797 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.67■□□□□ 0.9
EFNA3P52797 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFNA3P52797 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.67■□□□□ 0.9
EFNA3P52797 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFNA3P52797 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFNA3P52797 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
EFNA3P52797 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
EFNA3P52797 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
EFNA3P52797 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EFNA3P52797 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.66■□□□□ 0.9
EFNA3P52797 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
EFNA3P52797 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
EFNA3P52797 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.66■□□□□ 0.9
EFNA3P52797 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EFNA3P52797 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
EFNA3P52797 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
EFNA3P52797 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFNA3P52797 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.65■□□□□ 0.9
EFNA3P52797 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFNA3P52797 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFNA3P52797 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFNA3P52797 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.65■□□□□ 0.9
EFNA3P52797 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.65■□□□□ 0.9
EFNA3P52797 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFNA3P52797 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFNA3P52797 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
EFNA3P52797 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms