Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LTAP01374 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LTAP01374 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.61■□□□□ 0.25
LTAP01374 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LTAP01374 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LTAP01374 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LTAP01374 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LTAP01374 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.6■□□□□ 0.25
LTAP01374 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LTAP01374 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LTAP01374 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.6■□□□□ 0.25
LTAP01374 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LTAP01374 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.6■□□□□ 0.25
LTAP01374 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LTAP01374 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LTAP01374 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
LTAP01374 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LTAP01374 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LTAP01374 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LTAP01374 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LTAP01374 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LTAP01374 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.6■□□□□ 0.25
LTAP01374 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
LTAP01374 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
LTAP01374 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.6■□□□□ 0.25
LTAP01374 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LTAP01374 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LTAP01374 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LTAP01374 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.59■□□□□ 0.25
LTAP01374 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LTAP01374 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LTAP01374 AC004448.1-201ENST00000458332 883 ntBASIC16.59■□□□□ 0.25
LTAP01374 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LTAP01374 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LTAP01374 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.59■□□□□ 0.25
LTAP01374 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.59■□□□□ 0.25
LTAP01374 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LTAP01374 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LTAP01374 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.59■□□□□ 0.25
LTAP01374 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LTAP01374 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.59■□□□□ 0.25
LTAP01374 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.59■□□□□ 0.25
LTAP01374 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LTAP01374 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.58■□□□□ 0.25
LTAP01374 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LTAP01374 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LTAP01374 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LTAP01374 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LTAP01374 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.58■□□□□ 0.24
LTAP01374 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.58■□□□□ 0.24
LTAP01374 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LTAP01374 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LTAP01374 AC005229.4-201ENST00000610085 2198 ntBASIC16.57■□□□□ 0.24
LTAP01374 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LTAP01374 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LTAP01374 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.57■□□□□ 0.24
LTAP01374 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.57■□□□□ 0.24
LTAP01374 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LTAP01374 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.57■□□□□ 0.24
LTAP01374 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LTAP01374 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LTAP01374 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LTAP01374 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LTAP01374 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LTAP01374 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LTAP01374 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LTAP01374 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LTAP01374 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.56■□□□□ 0.24
LTAP01374 AC244015.2-201ENST00000616358 1861 ntBASIC16.56■□□□□ 0.24
LTAP01374 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LTAP01374 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LTAP01374 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LTAP01374 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
LTAP01374 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LTAP01374 AF131216.4-201ENST00000638924 1588 ntBASIC16.55■□□□□ 0.24
LTAP01374 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LTAP01374 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.55■□□□□ 0.24
LTAP01374 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LTAP01374 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LTAP01374 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LTAP01374 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LTAP01374 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LTAP01374 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LTAP01374 RNF126P1-201ENST00000567452 1320 ntBASIC16.55■□□□□ 0.24
LTAP01374 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LTAP01374 AC019171.1-201ENST00000601251 1056 ntBASIC16.55■□□□□ 0.24
LTAP01374 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
LTAP01374 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LTAP01374 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LTAP01374 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LTAP01374 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.55■□□□□ 0.24
LTAP01374 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LTAP01374 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.54■□□□□ 0.24
LTAP01374 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LTAP01374 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LTAP01374 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LTAP01374 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LTAP01374 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LTAP01374 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.54■□□□□ 0.24
LTAP01374 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms