Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CXCL13O43927 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CXCL13O43927 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CXCL13O43927 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CXCL13O43927 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CXCL13O43927 CA15P2-201ENST00000611168 834 ntBASIC19.78■□□□□ 0.76
CXCL13O43927 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CXCL13O43927 RASA4CP-201ENST00000424092 1398 ntBASIC19.78■□□□□ 0.76
CXCL13O43927 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CXCL13O43927 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CXCL13O43927 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.77■□□□□ 0.76
CXCL13O43927 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CXCL13O43927 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CXCL13O43927 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.77■□□□□ 0.76
CXCL13O43927 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.77■□□□□ 0.75
CXCL13O43927 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CXCL13O43927 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CXCL13O43927 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.76■□□□□ 0.75
CXCL13O43927 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
CXCL13O43927 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.76■□□□□ 0.75
CXCL13O43927 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CXCL13O43927 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CXCL13O43927 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.76■□□□□ 0.75
CXCL13O43927 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CXCL13O43927 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CXCL13O43927 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CXCL13O43927 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.76■□□□□ 0.75
CXCL13O43927 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.76■□□□□ 0.75
CXCL13O43927 AC126544.1-201ENST00000580842 1059 ntBASIC19.76■□□□□ 0.75
CXCL13O43927 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.76■□□□□ 0.75
CXCL13O43927 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CXCL13O43927 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CXCL13O43927 DUSP8P5-201ENST00000422884 1815 ntBASIC19.76■□□□□ 0.75
CXCL13O43927 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CXCL13O43927 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CXCL13O43927 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CXCL13O43927 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.76■□□□□ 0.75
CXCL13O43927 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL13O43927 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL13O43927 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL13O43927 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CXCL13O43927 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CXCL13O43927 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.75■□□□□ 0.75
CXCL13O43927 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL13O43927 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CXCL13O43927 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL13O43927 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL13O43927 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL13O43927 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL13O43927 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CXCL13O43927 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL13O43927 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL13O43927 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CXCL13O43927 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.74■□□□□ 0.75
CXCL13O43927 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.74■□□□□ 0.75
CXCL13O43927 AC105265.2-201ENST00000467189 838 ntBASIC19.74■□□□□ 0.75
CXCL13O43927 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL13O43927 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.73■□□□□ 0.75
CXCL13O43927 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL13O43927 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL13O43927 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL13O43927 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.73■□□□□ 0.75
CXCL13O43927 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.73■□□□□ 0.75
CXCL13O43927 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.73■□□□□ 0.75
CXCL13O43927 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.73■□□□□ 0.75
CXCL13O43927 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CXCL13O43927 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CXCL13O43927 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL13O43927 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL13O43927 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CXCL13O43927 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL13O43927 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.72■□□□□ 0.75
CXCL13O43927 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CXCL13O43927 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.72■□□□□ 0.75
CXCL13O43927 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL13O43927 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CXCL13O43927 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.71■□□□□ 0.75
CXCL13O43927 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CXCL13O43927 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CXCL13O43927 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CXCL13O43927 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CXCL13O43927 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.71■□□□□ 0.75
CXCL13O43927 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CXCL13O43927 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CXCL13O43927 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CXCL13O43927 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CXCL13O43927 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CXCL13O43927 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCL13O43927 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CXCL13O43927 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCL13O43927 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.7■□□□□ 0.74
CXCL13O43927 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CXCL13O43927 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.7■□□□□ 0.74
CXCL13O43927 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCL13O43927 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCL13O43927 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.7■□□□□ 0.74
CXCL13O43927 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCL13O43927 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.7■□□□□ 0.74
CXCL13O43927 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCL13O43927 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms