Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CGB1A6NKQ9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CGB1A6NKQ9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 AC010997.5-201ENST00000609182 354 ntBASIC17.61■□□□□ 0.41
CGB1A6NKQ9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CGB1A6NKQ9 AC242852.2-201ENST00000615738 1807 ntBASIC17.61■□□□□ 0.41
CGB1A6NKQ9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 TSPY9P-201ENST00000440215 945 ntBASIC17.6■□□□□ 0.41
CGB1A6NKQ9 TSPY11P-201ENST00000442607 1045 ntBASIC17.6■□□□□ 0.41
CGB1A6NKQ9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 DUX4L4-201ENST00000566884 1269 ntBASIC17.6■□□□□ 0.41
CGB1A6NKQ9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 LINC00565-201ENST00000562710 2331 ntBASIC17.6■□□□□ 0.41
CGB1A6NKQ9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CGB1A6NKQ9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CGB1A6NKQ9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.59■□□□□ 0.41
CGB1A6NKQ9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CGB1A6NKQ9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CGB1A6NKQ9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CGB1A6NKQ9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CGB1A6NKQ9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CGB1A6NKQ9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CGB1A6NKQ9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CGB1A6NKQ9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.59■□□□□ 0.41
CGB1A6NKQ9 UNC93B8-201ENST00000511903 705 ntBASIC17.59■□□□□ 0.41
CGB1A6NKQ9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CGB1A6NKQ9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.59■□□□□ 0.41
CGB1A6NKQ9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CGB1A6NKQ9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CGB1A6NKQ9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CGB1A6NKQ9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CGB1A6NKQ9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CGB1A6NKQ9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CGB1A6NKQ9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CGB1A6NKQ9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CGB1A6NKQ9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CGB1A6NKQ9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CGB1A6NKQ9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.58■□□□□ 0.4
CGB1A6NKQ9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.58■□□□□ 0.4
CGB1A6NKQ9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CGB1A6NKQ9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.57■□□□□ 0.4
CGB1A6NKQ9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CGB1A6NKQ9 AC139530.1-201ENST00000575312 1977 ntBASIC17.57■□□□□ 0.4
CGB1A6NKQ9 AC080038.3-201ENST00000623346 1952 ntBASIC17.57■□□□□ 0.4
CGB1A6NKQ9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CGB1A6NKQ9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CGB1A6NKQ9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CGB1A6NKQ9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.57■□□□□ 0.4
CGB1A6NKQ9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CGB1A6NKQ9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CGB1A6NKQ9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CGB1A6NKQ9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CGB1A6NKQ9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CGB1A6NKQ9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CGB1A6NKQ9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CGB1A6NKQ9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CGB1A6NKQ9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CGB1A6NKQ9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CGB1A6NKQ9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CGB1A6NKQ9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CGB1A6NKQ9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CGB1A6NKQ9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CGB1A6NKQ9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CGB1A6NKQ9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.56■□□□□ 0.4
CGB1A6NKQ9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms