Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 SLC6A10P-202ENST00000431994 2058 ntBASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 AC020763.4-201ENST00000623414 4170 ntBASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCP4L1A6NKN8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.41■□□□□ 0.38
PCP4L1A6NKN8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCP4L1A6NKN8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCP4L1A6NKN8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCP4L1A6NKN8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCP4L1A6NKN8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCP4L1A6NKN8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCP4L1A6NKN8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCP4L1A6NKN8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCP4L1A6NKN8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCP4L1A6NKN8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCP4L1A6NKN8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.4■□□□□ 0.38
PCP4L1A6NKN8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCP4L1A6NKN8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PCP4L1A6NKN8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 AP004833.2-201ENST00000532228 1454 ntBASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCP4L1A6NKN8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCP4L1A6NKN8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCP4L1A6NKN8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
PCP4L1A6NKN8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC17.38■□□□□ 0.37
PCP4L1A6NKN8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCP4L1A6NKN8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.38■□□□□ 0.37
PCP4L1A6NKN8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCP4L1A6NKN8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.38■□□□□ 0.37
PCP4L1A6NKN8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCP4L1A6NKN8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCP4L1A6NKN8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCP4L1A6NKN8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCP4L1A6NKN8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCP4L1A6NKN8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCP4L1A6NKN8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCP4L1A6NKN8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCP4L1A6NKN8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCP4L1A6NKN8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PCP4L1A6NKN8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCP4L1A6NKN8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCP4L1A6NKN8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCP4L1A6NKN8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms