Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV3S1A0A5B6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TCRBV3S1A0A5B6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV3S1A0A5B6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV3S1A0A5B6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV3S1A0A5B6 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.69■□□□□ 0.9
TCRBV3S1A0A5B6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV3S1A0A5B6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV3S1A0A5B6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
TCRBV3S1A0A5B6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV3S1A0A5B6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV3S1A0A5B6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV3S1A0A5B6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 AC144652.1-201ENST00000609974 1624 ntBASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 AL592293.1-201ENST00000502889 1188 ntBASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 MIR6765-201ENST00000614092 87 ntBASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.68■□□□□ 0.9
TCRBV3S1A0A5B6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 GPX1-201ENST00000419349 1106 ntBASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV3S1A0A5B6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV3S1A0A5B6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV3S1A0A5B6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV3S1A0A5B6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV3S1A0A5B6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV3S1A0A5B6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.66■□□□□ 0.9
TCRBV3S1A0A5B6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TCRBV3S1A0A5B6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV3S1A0A5B6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.66■□□□□ 0.9
TCRBV3S1A0A5B6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV3S1A0A5B6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV3S1A0A5B6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV3S1A0A5B6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV3S1A0A5B6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV3S1A0A5B6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV3S1A0A5B6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.65■□□□□ 0.9
TCRBV3S1A0A5B6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV3S1A0A5B6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV3S1A0A5B6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV3S1A0A5B6 AL121603.2-201ENST00000557373 2117 ntBASIC20.65■□□□□ 0.9
TCRBV3S1A0A5B6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV3S1A0A5B6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.65■□□□□ 0.9
TCRBV3S1A0A5B6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.65■□□□□ 0.9
TCRBV3S1A0A5B6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV3S1A0A5B6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TCRBV3S1A0A5B6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TCRBV3S1A0A5B6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV3S1A0A5B6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TCRBV3S1A0A5B6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.64■□□□□ 0.9
TCRBV3S1A0A5B6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TCRBV3S1A0A5B6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TCRBV3S1A0A5B6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.64■□□□□ 0.89
TCRBV3S1A0A5B6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV3S1A0A5B6 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.63■□□□□ 0.89
TCRBV3S1A0A5B6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.63■□□□□ 0.89
TCRBV3S1A0A5B6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV3S1A0A5B6 AC004448.1-201ENST00000458332 883 ntBASIC20.63■□□□□ 0.89
TCRBV3S1A0A5B6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.63■□□□□ 0.89
TCRBV3S1A0A5B6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.63■□□□□ 0.89
TCRBV3S1A0A5B6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms