Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IGHV4-28A0A0C4DH34 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
IGHV4-28A0A0C4DH34 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
IGHV4-28A0A0C4DH34 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IGHV4-28A0A0C4DH34 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.92■□□□□ 0.14
IGHV4-28A0A0C4DH34 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IGHV4-28A0A0C4DH34 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.92■□□□□ 0.14
IGHV4-28A0A0C4DH34 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IGHV4-28A0A0C4DH34 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
IGHV4-28A0A0C4DH34 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 AC092068.2-201ENST00000590491 1708 ntBASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 TSPY26P-201ENST00000476365 1326 ntBASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
IGHV4-28A0A0C4DH34 THRA-202ENST00000394121 2260 ntTSL 2 BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 RARA-203ENST00000394086 2008 ntTSL 2 BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.89■□□□□ 0.13
IGHV4-28A0A0C4DH34 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 IRS3P-201ENST00000223076 1006 ntBASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 IGHV3-19-201ENST00000521488 291 ntBASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IGHV4-28A0A0C4DH34 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.87■□□□□ 0.13
IGHV4-28A0A0C4DH34 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms