Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 DUX4L11-201ENST00000611504 1267 ntBASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 DUX4L12-201ENST00000614593 1267 ntBASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 DUX4L14-201ENST00000621227 1267 ntBASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV12-1A0A0B4J245 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV12-1A0A0B4J245 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 AL162393.1-201ENST00000437852 946 ntBASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
TRAV12-1A0A0B4J245 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-1A0A0B4J245 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV12-1A0A0B4J245 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV12-1A0A0B4J245 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC15.46■□□□□ 0.07
TRAV12-1A0A0B4J245 SSSCA1-AS1-201ENST00000567594 614 ntBASIC15.46■□□□□ 0.07
TRAV12-1A0A0B4J245 MOB2-207ENST00000614710 705 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV12-1A0A0B4J245 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV12-1A0A0B4J245 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-1A0A0B4J245 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
TRAV12-1A0A0B4J245 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV12-1A0A0B4J245 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 REST-210ENST00000638187 1334 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 RP9P-202ENST00000450133 1212 ntBASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 HGH1-207ENST00000628266 258 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 AL353803.4-201ENST00000565882 1934 ntBASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV12-1A0A0B4J245 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-1A0A0B4J245 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms