Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 AC061965.1-201ENST00000560524 1465 ntBASIC13.12□□□□□ -0.31
NCDNQ9UBB6 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 GAPDHP65-201ENST00000425487 1006 ntBASIC13.12□□□□□ -0.31
NCDNQ9UBB6 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 RN7SL76P-201ENST00000482435 289 ntBASIC13.12□□□□□ -0.31
NCDNQ9UBB6 BCRP5-201ENST00000514371 253 ntBASIC13.12□□□□□ -0.31
NCDNQ9UBB6 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 DNM1P50-201ENST00000565767 508 ntBASIC13.12□□□□□ -0.31
NCDNQ9UBB6 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 AC103810.4-201ENST00000578601 257 ntBASIC13.12□□□□□ -0.31
NCDNQ9UBB6 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 AC020763.2-201ENST00000623155 1255 ntBASIC13.12□□□□□ -0.31
NCDNQ9UBB6 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 AC012358.2-201ENST00000430010 1434 ntBASIC13.12□□□□□ -0.31
NCDNQ9UBB6 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 FKBP4P1-201ENST00000507284 1347 ntBASIC13.12□□□□□ -0.31
NCDNQ9UBB6 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NCDNQ9UBB6 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 TEDDM2P-201ENST00000414169 786 ntBASIC13.11□□□□□ -0.31
NCDNQ9UBB6 HNRNPA1P68-201ENST00000425806 979 ntBASIC13.11□□□□□ -0.31
NCDNQ9UBB6 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 MT1G-204ENST00000569500 305 ntTSL 3 BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
NCDNQ9UBB6 AL133551.1-201ENST00000610279 1222 ntBASIC13.11□□□□□ -0.31
NCDNQ9UBB6 AL137028.2-201ENST00000614601 256 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms