Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 AOC4P-203ENST00000566825 2289 ntBASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 CICP1-201ENST00000416803 2410 ntBASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 VENTXP1-201ENST00000569334 2716 ntBASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 RPL13AP19-201ENST00000434320 584 ntBASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 RN7SL147P-201ENST00000487345 298 ntBASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 PRDX2P3-201ENST00000515779 586 ntBASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 RNA5SP420-201ENST00000516997 137 ntBASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 OR4A49P-201ENST00000527050 632 ntBASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 PHBP18-201ENST00000546648 813 ntBASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 RPSAP67-201ENST00000584105 862 ntBASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 CYP4F36P-201ENST00000589193 186 ntBASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 AC006158.1-201ENST00000610661 249 ntBASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PRICKLE4Q2TBC4 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC12.3□□□□□ -0.44
PRICKLE4Q2TBC4 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PRICKLE4Q2TBC4 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PRICKLE4Q2TBC4 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PRICKLE4Q2TBC4 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
PRICKLE4Q2TBC4 AC009093.9-201ENST00000566038 1611 ntBASIC12.3□□□□□ -0.44
PRICKLE4Q2TBC4 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PRICKLE4Q2TBC4 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.3□□□□□ -0.44
PRICKLE4Q2TBC4 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.3□□□□□ -0.44
PRICKLE4Q2TBC4 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC12.3□□□□□ -0.44
PRICKLE4Q2TBC4 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PRICKLE4Q2TBC4 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PRICKLE4Q2TBC4 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms