Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 AC008622.3-201ENST00000621170 600 ntBASIC11.9□□□□□ -0.5
ZIC3O60481 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
ZIC3O60481 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.9□□□□□ -0.5
ZIC3O60481 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ZIC3O60481 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 JAML-211ENST00000533261 1508 ntTSL 5 BASIC11.9□□□□□ -0.5
ZIC3O60481 Z98257.2-202ENST00000641138 1548 ntBASIC11.9□□□□□ -0.5
ZIC3O60481 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
ZIC3O60481 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC11.9□□□□□ -0.51
ZIC3O60481 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.9□□□□□ -0.51
ZIC3O60481 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC11.9□□□□□ -0.51
ZIC3O60481 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.9□□□□□ -0.51
ZIC3O60481 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
ZIC3O60481 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
ZIC3O60481 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
ZIC3O60481 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 AC026271.1-201ENST00000447794 1348 ntBASIC11.89□□□□□ -0.51
ZIC3O60481 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC11.89□□□□□ -0.51
ZIC3O60481 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.89□□□□□ -0.51
ZIC3O60481 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC11.89□□□□□ -0.51
ZIC3O60481 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
ZIC3O60481 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
ZIC3O60481 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC11.89□□□□□ -0.51
ZIC3O60481 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.89□□□□□ -0.51
ZIC3O60481 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
ZIC3O60481 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 AC024475.2-201ENST00000312173 879 ntBASIC11.89□□□□□ -0.51
ZIC3O60481 RNA5SP84-201ENST00000364740 107 ntBASIC11.89□□□□□ -0.51
ZIC3O60481 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC11.89□□□□□ -0.51
ZIC3O60481 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC11.89□□□□□ -0.51
ZIC3O60481 MIR1227-201ENST00000408484 88 ntBASIC11.89□□□□□ -0.51
ZIC3O60481 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC11.89□□□□□ -0.51
ZIC3O60481 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC11.89□□□□□ -0.51
ZIC3O60481 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 HNRNPA1P4-201ENST00000509706 756 ntBASIC11.89□□□□□ -0.51
ZIC3O60481 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
ZIC3O60481 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC11.89□□□□□ -0.51
ZIC3O60481 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ZIC3O60481 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
ZIC3O60481 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC11.89□□□□□ -0.51
ZIC3O60481 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC11.89□□□□□ -0.51
ZIC3O60481 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC11.89□□□□□ -0.51
ZIC3O60481 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 AC022364.1-202ENST00000617468 2409 ntBASIC11.89□□□□□ -0.51
ZIC3O60481 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC11.89□□□□□ -0.51
ZIC3O60481 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
ZIC3O60481 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ZIC3O60481 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
ZIC3O60481 AL359183.1-201ENST00000623796 2132 ntBASIC11.89□□□□□ -0.51
ZIC3O60481 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC11.89□□□□□ -0.51
ZIC3O60481 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ZIC3O60481 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 AC136604.2-201ENST00000500262 1966 ntTSL 2 BASIC11.88□□□□□ -0.51
ZIC3O60481 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
ZIC3O60481 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC11.88□□□□□ -0.51
ZIC3O60481 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC11.88□□□□□ -0.51
ZIC3O60481 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 AC138969.2-201ENST00000532739 9932 ntBASIC11.88□□□□□ -0.51
ZIC3O60481 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.88□□□□□ -0.51
ZIC3O60481 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ZIC3O60481 AC102953.2-201ENST00000609755 3026 ntBASIC11.88□□□□□ -0.51
ZIC3O60481 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
ZIC3O60481 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
ZIC3O60481 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC11.88□□□□□ -0.51
ZIC3O60481 SNORA30.1-201ENST00000363193 129 ntBASIC11.88□□□□□ -0.51
ZIC3O60481 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC11.88□□□□□ -0.51
ZIC3O60481 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
ZIC3O60481 SERF2-205ENST00000403425 690 ntTSL 2 BASIC11.88□□□□□ -0.51
ZIC3O60481 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC11.88□□□□□ -0.51
ZIC3O60481 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC11.88□□□□□ -0.51
ZIC3O60481 NME6-208ENST00000435684 599 ntTSL 2 BASIC11.88□□□□□ -0.51
ZIC3O60481 AC010677.1-201ENST00000441690 412 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms