Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 CYP4F10P-201ENST00000589560 752 ntBASIC13.16□□□□□ -0.3
NCDNQ9UBB6 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 AL356583.1-201ENST00000398739 1371 ntBASIC13.16□□□□□ -0.3
NCDNQ9UBB6 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 AF013593.1-201ENST00000458074 1487 ntBASIC13.16□□□□□ -0.3
NCDNQ9UBB6 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.16□□□□□ -0.3
NCDNQ9UBB6 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 AC093462.1-201ENST00000621167 1683 ntBASIC13.15□□□□□ -0.3
NCDNQ9UBB6 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.15□□□□□ -0.3
NCDNQ9UBB6 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 AC012100.1-201ENST00000470304 282 ntBASIC13.15□□□□□ -0.3
NCDNQ9UBB6 AC067942.2-201ENST00000506227 1268 ntBASIC13.15□□□□□ -0.3
NCDNQ9UBB6 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 AP006621.5-202ENST00000623692 636 ntBASIC13.15□□□□□ -0.3
NCDNQ9UBB6 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 AC034205.3-201ENST00000603595 1376 ntBASIC13.15□□□□□ -0.3
NCDNQ9UBB6 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NCDNQ9UBB6 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NCDNQ9UBB6 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 SRSF9P1-201ENST00000399149 530 ntBASIC13.14□□□□□ -0.31
NCDNQ9UBB6 SNORD23-201ENST00000408876 110 ntBASIC13.14□□□□□ -0.31
NCDNQ9UBB6 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC13.14□□□□□ -0.31
NCDNQ9UBB6 HNRNPA1P30-202ENST00000440699 997 ntBASIC13.14□□□□□ -0.31
NCDNQ9UBB6 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms