Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 MIR632-201ENST00000385193 94 ntBASIC13.26□□□□□ -0.29
CSNK1DP48730 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 MIPEPP1-201ENST00000413533 2027 ntBASIC13.26□□□□□ -0.29
CSNK1DP48730 AC005822.1-201ENST00000414124 1034 ntBASIC13.26□□□□□ -0.29
CSNK1DP48730 TEDDM2P-201ENST00000414169 786 ntBASIC13.26□□□□□ -0.29
CSNK1DP48730 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC13.26□□□□□ -0.29
CSNK1DP48730 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC13.26□□□□□ -0.29
CSNK1DP48730 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CSNK1DP48730 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC13.26□□□□□ -0.29
CSNK1DP48730 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC13.26□□□□□ -0.29
CSNK1DP48730 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.26□□□□□ -0.29
CSNK1DP48730 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 AC022364.1-202ENST00000617468 2409 ntBASIC13.26□□□□□ -0.29
CSNK1DP48730 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC13.26□□□□□ -0.29
CSNK1DP48730 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC13.26□□□□□ -0.29
CSNK1DP48730 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CSNK1DP48730 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CSNK1DP48730 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CSNK1DP48730 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.26□□□□□ -0.29
CSNK1DP48730 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.25□□□□□ -0.29
CSNK1DP48730 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CSNK1DP48730 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.25□□□□□ -0.29
CSNK1DP48730 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
CSNK1DP48730 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.25□□□□□ -0.29
CSNK1DP48730 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 LINC00567-201ENST00000569854 3409 ntBASIC13.25□□□□□ -0.29
CSNK1DP48730 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC13.25□□□□□ -0.29
CSNK1DP48730 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.25□□□□□ -0.29
CSNK1DP48730 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC13.25□□□□□ -0.29
CSNK1DP48730 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 AC138969.2-201ENST00000532739 9932 ntBASIC13.25□□□□□ -0.29
CSNK1DP48730 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 COQ4-202ENST00000372875 928 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC13.25□□□□□ -0.29
CSNK1DP48730 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC13.25□□□□□ -0.29
CSNK1DP48730 CITED1-206ENST00000431381 941 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC13.25□□□□□ -0.29
CSNK1DP48730 AL139008.1-201ENST00000437894 228 ntBASIC13.25□□□□□ -0.29
CSNK1DP48730 AC010677.1-201ENST00000441690 412 ntBASIC13.25□□□□□ -0.29
CSNK1DP48730 CITED1-207ENST00000445983 820 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC13.25□□□□□ -0.29
CSNK1DP48730 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CSNK1DP48730 RBM4-207ENST00000506523 654 ntTSL 3 BASIC13.25□□□□□ -0.29
CSNK1DP48730 AC114812.4-201ENST00000506676 757 ntBASIC13.25□□□□□ -0.29
CSNK1DP48730 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 AC004801.1-201ENST00000549557 360 ntBASIC13.25□□□□□ -0.29
CSNK1DP48730 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC13.25□□□□□ -0.29
CSNK1DP48730 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 CCND3P2-201ENST00000579393 537 ntBASIC13.25□□□□□ -0.29
CSNK1DP48730 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 AL353622.2-201ENST00000605846 425 ntBASIC13.25□□□□□ -0.29
CSNK1DP48730 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CSNK1DP48730 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 AC087386.2-201ENST00000623212 4637 ntBASIC13.25□□□□□ -0.29
CSNK1DP48730 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms