Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CLK1P49759 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CLK1P49759 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC12.67□□□□□ -0.38
CLK1P49759 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CLK1P49759 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.67□□□□□ -0.38
CLK1P49759 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC12.67□□□□□ -0.38
CLK1P49759 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLK1P49759 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.66□□□□□ -0.38
CLK1P49759 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.66□□□□□ -0.38
CLK1P49759 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CLK1P49759 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CLK1P49759 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC12.66□□□□□ -0.38
CLK1P49759 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12.66□□□□□ -0.38
CLK1P49759 AL354919.1-201ENST00000453837 2257 ntTSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
CLK1P49759 MIR645-201ENST00000385283 94 ntBASIC12.66□□□□□ -0.38
CLK1P49759 AL662890.1-201ENST00000396818 632 ntBASIC12.66□□□□□ -0.38
CLK1P49759 SNORA50C-201ENST00000408535 133 ntBASIC12.66□□□□□ -0.38
CLK1P49759 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.66□□□□□ -0.38
CLK1P49759 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.66□□□□□ -0.38
CLK1P49759 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CLK1P49759 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CLK1P49759 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 RN7SL665P-201ENST00000578793 300 ntBASIC12.66□□□□□ -0.38
CLK1P49759 AL109837.1-201ENST00000603272 613 ntBASIC12.66□□□□□ -0.38
CLK1P49759 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
CLK1P49759 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CLK1P49759 SNORA50.1-201ENST00000628590 135 ntBASIC12.66□□□□□ -0.38
CLK1P49759 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 FLJ30679-201ENST00000624773 1980 ntBASIC12.66□□□□□ -0.38
CLK1P49759 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.66□□□□□ -0.38
CLK1P49759 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLK1P49759 PPP1R26P1-201ENST00000474415 3613 ntBASIC12.66□□□□□ -0.38
CLK1P49759 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.65□□□□□ -0.38
CLK1P49759 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.65□□□□□ -0.38
CLK1P49759 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CLK1P49759 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 AC131888.1-201ENST00000625028 2168 ntBASIC12.65□□□□□ -0.38
CLK1P49759 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.65□□□□□ -0.38
CLK1P49759 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CLK1P49759 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.65□□□□□ -0.38
CLK1P49759 SSR4P1-201ENST00000415143 412 ntBASIC12.65□□□□□ -0.38
CLK1P49759 AC098934.1-203ENST00000442868 1262 ntBASIC12.65□□□□□ -0.38
CLK1P49759 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CLK1P49759 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.65□□□□□ -0.38
CLK1P49759 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.65□□□□□ -0.38
CLK1P49759 COQ10BP2-201ENST00000513804 724 ntBASIC12.65□□□□□ -0.38
CLK1P49759 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.65□□□□□ -0.38
CLK1P49759 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms