Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MTHFRP42898 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MTHFRP42898 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MTHFRP42898 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC13.93□□□□□ -0.18
MTHFRP42898 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MTHFRP42898 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MTHFRP42898 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MTHFRP42898 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.93□□□□□ -0.18
MTHFRP42898 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MTHFRP42898 AC106872.9-201ENST00000512437 1393 ntBASIC13.93□□□□□ -0.18
MTHFRP42898 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MTHFRP42898 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.93□□□□□ -0.18
MTHFRP42898 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC13.93□□□□□ -0.18
MTHFRP42898 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MTHFRP42898 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
MTHFRP42898 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MTHFRP42898 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
MTHFRP42898 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MTHFRP42898 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
MTHFRP42898 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
MTHFRP42898 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.92□□□□□ -0.18
MTHFRP42898 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.92□□□□□ -0.18
MTHFRP42898 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.92□□□□□ -0.18
MTHFRP42898 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.92□□□□□ -0.18
MTHFRP42898 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC13.92□□□□□ -0.18
MTHFRP42898 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
MTHFRP42898 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC13.92□□□□□ -0.18
MTHFRP42898 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.92□□□□□ -0.18
MTHFRP42898 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
MTHFRP42898 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
MTHFRP42898 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC13.92□□□□□ -0.18
MTHFRP42898 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
MTHFRP42898 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
MTHFRP42898 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC13.92□□□□□ -0.18
MTHFRP42898 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC13.92□□□□□ -0.18
MTHFRP42898 CA5BP1-205ENST00000435806 1064 ntBASIC13.92□□□□□ -0.18
MTHFRP42898 RPE-208ENST00000436630 1128 ntTSL 2 BASIC13.92□□□□□ -0.18
MTHFRP42898 RNF7-205ENST00000480908 782 ntTSL 4 BASIC13.92□□□□□ -0.18
MTHFRP42898 ALDOAP1-201ENST00000491506 1078 ntBASIC13.92□□□□□ -0.18
MTHFRP42898 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC13.92□□□□□ -0.18
MTHFRP42898 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
MTHFRP42898 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
MTHFRP42898 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
MTHFRP42898 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.92□□□□□ -0.18
MTHFRP42898 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
MTHFRP42898 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
MTHFRP42898 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC13.92□□□□□ -0.18
MTHFRP42898 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MTHFRP42898 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.91□□□□□ -0.18
MTHFRP42898 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.91□□□□□ -0.18
MTHFRP42898 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
MTHFRP42898 NUTM2HP-201ENST00000442076 2498 ntBASIC13.91□□□□□ -0.18
MTHFRP42898 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
MTHFRP42898 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.91□□□□□ -0.18
MTHFRP42898 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
MTHFRP42898 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
MTHFRP42898 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.91□□□□□ -0.18
MTHFRP42898 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
MTHFRP42898 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
MTHFRP42898 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
MTHFRP42898 CFL1P6-201ENST00000400899 494 ntBASIC13.91□□□□□ -0.18
MTHFRP42898 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC13.91□□□□□ -0.18
MTHFRP42898 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC13.91□□□□□ -0.18
MTHFRP42898 AC053503.3-201ENST00000448375 114 ntBASIC13.91□□□□□ -0.18
MTHFRP42898 TULP3P1-202ENST00000453253 1291 ntBASIC13.91□□□□□ -0.18
MTHFRP42898 RN7SL789P-201ENST00000478944 293 ntBASIC13.91□□□□□ -0.18
MTHFRP42898 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
MTHFRP42898 HINT1-204ENST00000506908 681 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms