Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20BQ9P0W2 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HMG20BQ9P0W2 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMG20BQ9P0W2 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 HSPA8P9-201ENST00000485881 1943 ntBASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 HDGF-202ENST00000368206 960 ntTSL 5 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 AF274858.1-201ENST00000406288 372 ntBASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 RPSAP6-201ENST00000417882 882 ntBASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 RPL29P2-201ENST00000488409 460 ntBASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 AC079414.2-201ENST00000567157 1104 ntBASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 ANKRD26P1-203ENST00000569528 966 ntBASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 CCND3P2-201ENST00000579393 537 ntBASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 MME-218ENST00000625667 363 ntTSL 5 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 ZDHHC8P1-202ENST00000418264 1403 ntBASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 AL031719.1-201ENST00000623365 2587 ntBASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMG20BQ9P0W2 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 TUBB8P5-201ENST00000445286 1351 ntBASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 BICD1P1-201ENST00000457832 1222 ntBASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 AC114812.4-201ENST00000506676 757 ntBASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 FAM86KP-201ENST00000509817 987 ntBASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 METTL23-211ENST00000589977 617 ntTSL 3 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 PCDHB18P-202ENST00000526308 3197 ntBASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMG20BQ9P0W2 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMG20BQ9P0W2 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms