Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SCN2BO60939 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC12.68□□□□□ -0.38
SCN2BO60939 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC12.68□□□□□ -0.38
SCN2BO60939 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.68□□□□□ -0.38
SCN2BO60939 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 SRL-202ENST00000537996 1814 ntTSL 2 BASIC12.68□□□□□ -0.38
SCN2BO60939 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 RN7SKP102-201ENST00000411186 315 ntBASIC12.68□□□□□ -0.38
SCN2BO60939 GUSBP10-201ENST00000417412 665 ntBASIC12.68□□□□□ -0.38
SCN2BO60939 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC12.68□□□□□ -0.38
SCN2BO60939 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.68□□□□□ -0.38
SCN2BO60939 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.68□□□□□ -0.38
SCN2BO60939 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC12.68□□□□□ -0.38
SCN2BO60939 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.68□□□□□ -0.38
SCN2BO60939 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.68□□□□□ -0.38
SCN2BO60939 FAM213AP2-201ENST00000521579 683 ntBASIC12.68□□□□□ -0.38
SCN2BO60939 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.68□□□□□ -0.38
SCN2BO60939 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC12.68□□□□□ -0.38
SCN2BO60939 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.68□□□□□ -0.38
SCN2BO60939 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.68□□□□□ -0.38
SCN2BO60939 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.68□□□□□ -0.38
SCN2BO60939 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.68□□□□□ -0.38
SCN2BO60939 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.68□□□□□ -0.38
SCN2BO60939 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SCN2BO60939 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
SCN2BO60939 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.68□□□□□ -0.38
SCN2BO60939 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCN2BO60939 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SCN2BO60939 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SCN2BO60939 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SCN2BO60939 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.67□□□□□ -0.38
SCN2BO60939 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
SCN2BO60939 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SCN2BO60939 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 TRIM80P-201ENST00000455685 2848 ntBASIC12.67□□□□□ -0.38
SCN2BO60939 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC12.67□□□□□ -0.38
SCN2BO60939 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12.67□□□□□ -0.38
SCN2BO60939 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
SCN2BO60939 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SCN2BO60939 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.67□□□□□ -0.38
SCN2BO60939 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 HLA-DMA-203ENST00000395305 777 ntBASIC12.67□□□□□ -0.38
SCN2BO60939 ACTBP14-201ENST00000411655 1089 ntBASIC12.67□□□□□ -0.38
SCN2BO60939 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.67□□□□□ -0.38
SCN2BO60939 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.67□□□□□ -0.38
SCN2BO60939 CEP164P1-201ENST00000455142 418 ntBASIC12.67□□□□□ -0.38
SCN2BO60939 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.67□□□□□ -0.38
SCN2BO60939 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.67□□□□□ -0.38
SCN2BO60939 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.67□□□□□ -0.38
SCN2BO60939 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC12.67□□□□□ -0.38
SCN2BO60939 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.67□□□□□ -0.38
SCN2BO60939 AC007250.1-201ENST00000608934 338 ntBASIC12.67□□□□□ -0.38
SCN2BO60939 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.67□□□□□ -0.38
SCN2BO60939 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC12.67□□□□□ -0.38
SCN2BO60939 AP001184.1-201ENST00000637936 376 ntBASIC12.67□□□□□ -0.38
SCN2BO60939 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
SCN2BO60939 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC12.67□□□□□ -0.38
SCN2BO60939 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SCN2BO60939 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
SCN2BO60939 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC12.67□□□□□ -0.38
SCN2BO60939 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SCN2BO60939 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.67□□□□□ -0.38
SCN2BO60939 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms