Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.09□□□□□ -0.47
PARPBPQ9NWS1 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
PARPBPQ9NWS1 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PARPBPQ9NWS1 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
PARPBPQ9NWS1 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PARPBPQ9NWS1 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.09□□□□□ -0.47
PARPBPQ9NWS1 AL365181.1-201ENST00000564032 1828 ntBASIC12.09□□□□□ -0.47
PARPBPQ9NWS1 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PARPBPQ9NWS1 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PARPBPQ9NWS1 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
PARPBPQ9NWS1 CTBP2P8-201ENST00000422584 1330 ntBASIC12.09□□□□□ -0.47
PARPBPQ9NWS1 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PARPBPQ9NWS1 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.09□□□□□ -0.47
PARPBPQ9NWS1 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PARPBPQ9NWS1 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
PARPBPQ9NWS1 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
PARPBPQ9NWS1 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
PARPBPQ9NWS1 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
PARPBPQ9NWS1 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.47
PARPBPQ9NWS1 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
PARPBPQ9NWS1 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 AC103563.1-201ENST00000429316 123 ntBASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 MIR4722-201ENST00000578292 60 ntBASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 AC105137.3-201ENST00000617588 984 ntBASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 AC004623.1-201ENST00000624592 2127 ntBASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 AL445250.1-201ENST00000641671 2259 ntBASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.08□□□□□ -0.48
PARPBPQ9NWS1 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 AL355102.3-201ENST00000554299 1678 ntBASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 RPL10-203ENST00000406022 748 ntTSL 3 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 HLA-DPB2-205ENST00000435074 1188 ntBASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 OR2A1-AS1-210ENST00000496968 531 ntBASIC12.07□□□□□ -0.48
PARPBPQ9NWS1 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms