Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SLC1A1P43005 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SLC1A1P43005 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SLC1A1P43005 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SLC1A1P43005 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SLC1A1P43005 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SLC1A1P43005 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
SLC1A1P43005 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
SLC1A1P43005 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.01□□□□□ -0.17
SLC1A1P43005 RN7SKP109-201ENST00000410592 316 ntBASIC14.01□□□□□ -0.17
SLC1A1P43005 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14.01□□□□□ -0.17
SLC1A1P43005 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.01□□□□□ -0.17
SLC1A1P43005 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC1A1P43005 AC006529.1-201ENST00000459978 637 ntBASIC14.01□□□□□ -0.17
SLC1A1P43005 AC130709.1-201ENST00000484779 1212 ntBASIC14.01□□□□□ -0.17
SLC1A1P43005 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC1A1P43005 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC1A1P43005 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14.01□□□□□ -0.17
SLC1A1P43005 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SLC1A1P43005 AC103810.10-201ENST00000606504 343 ntBASIC14.01□□□□□ -0.17
SLC1A1P43005 AP000322.3-201ENST00000608665 388 ntBASIC14.01□□□□□ -0.17
SLC1A1P43005 AL160287.1-203ENST00000637960 1061 ntBASIC14.01□□□□□ -0.17
SLC1A1P43005 AL139823.1-201ENST00000641871 1225 ntBASIC14.01□□□□□ -0.17
SLC1A1P43005 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC1A1P43005 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC1A1P43005 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 PCDHB17P-202ENST00000623466 3066 ntBASIC14.01□□□□□ -0.17
SLC1A1P43005 CSPG4P11-201ENST00000560634 4910 ntBASIC14.01□□□□□ -0.17
SLC1A1P43005 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SLC1A1P43005 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC14□□□□□ -0.17
SLC1A1P43005 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SLC1A1P43005 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14□□□□□ -0.17
SLC1A1P43005 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
SLC1A1P43005 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SLC1A1P43005 AC012358.2-201ENST00000430010 1434 ntBASIC14□□□□□ -0.17
SLC1A1P43005 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC14□□□□□ -0.17
SLC1A1P43005 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SLC1A1P43005 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 OR7E115P-201ENST00000382617 1024 ntBASIC14□□□□□ -0.17
SLC1A1P43005 AL662890.1-201ENST00000396818 632 ntBASIC14□□□□□ -0.17
SLC1A1P43005 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14□□□□□ -0.17
SLC1A1P43005 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14□□□□□ -0.17
SLC1A1P43005 RN7SL720P-201ENST00000488178 304 ntBASIC14□□□□□ -0.17
SLC1A1P43005 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
SLC1A1P43005 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SLC1A1P43005 METTL7AP1-201ENST00000547343 496 ntBASIC14□□□□□ -0.17
SLC1A1P43005 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SLC1A1P43005 MT3-202ENST00000561640 514 ntTSL 3 BASIC14□□□□□ -0.17
SLC1A1P43005 FGFR3P5-201ENST00000564496 886 ntBASIC14□□□□□ -0.17
SLC1A1P43005 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC14□□□□□ -0.17
SLC1A1P43005 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14□□□□□ -0.17
SLC1A1P43005 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14□□□□□ -0.17
SLC1A1P43005 AC097724.1-201ENST00000609581 426 ntBASIC14□□□□□ -0.17
SLC1A1P43005 AC084781.1-201ENST00000613737 656 ntBASIC14□□□□□ -0.17
SLC1A1P43005 MIR6787-201ENST00000616675 61 ntBASIC14□□□□□ -0.17
SLC1A1P43005 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SLC1A1P43005 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SLC1A1P43005 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SLC1A1P43005 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SLC1A1P43005 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SLC1A1P43005 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14□□□□□ -0.17
SLC1A1P43005 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14□□□□□ -0.17
SLC1A1P43005 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14□□□□□ -0.17
SLC1A1P43005 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms